XKDM_BACSU
ID XKDM_BACSU Reviewed; 147 AA.
AC P54332;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Phage-like element PBSX protein XkdM;
GN Name=xkdM; OrderedLocusNames=BSU12660;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RA Krogh S., O'Reilly M., Nolan N., Devine K.M.;
RL Submitted (MAR-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
CC -!- SIMILARITY: To B.subtilis YqbM. {ECO:0000305}.
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DR EMBL; Z70177; CAA94035.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB13123.1; -; Genomic_DNA.
DR PIR; D69732; D69732.
DR RefSeq; NP_389148.1; NC_000964.3.
DR RefSeq; WP_003232677.1; NZ_JNCM01000035.1.
DR PDB; 2GUJ; X-ray; 3.00 A; A/B=1-147.
DR PDB; 5LI2; EM; 6.20 A; G/H/I/J/K/L=1-147.
DR PDBsum; 2GUJ; -.
DR PDBsum; 5LI2; -.
DR AlphaFoldDB; P54332; -.
DR SMR; P54332; -.
DR STRING; 224308.BSU12660; -.
DR PaxDb; P54332; -.
DR PRIDE; P54332; -.
DR EnsemblBacteria; CAB13123; CAB13123; BSU_12660.
DR GeneID; 938181; -.
DR KEGG; bsu:BSU12660; -.
DR PATRIC; fig|224308.179.peg.1372; -.
DR eggNOG; ENOG5032S1D; Bacteria.
DR OMA; SATFHYN; -.
DR PhylomeDB; P54332; -.
DR BioCyc; BSUB:BSU12660-MON; -.
DR EvolutionaryTrace; P54332; -.
DR Proteomes; UP000001570; Chromosome.
DR Gene3D; 2.30.110.40; -; 1.
DR InterPro; IPR018989; DUF2001.
DR InterPro; IPR038628; XkdM-like_sf.
DR Pfam; PF09393; DUF2001; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..147
FT /note="Phage-like element PBSX protein XkdM"
FT /id="PRO_0000066026"
FT STRAND 8..18
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 26..33
FT /evidence="ECO:0007829|PDB:2GUJ"
FT TURN 40..43
FT /evidence="ECO:0007829|PDB:2GUJ"
FT HELIX 44..47
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 57..64
FT /evidence="ECO:0007829|PDB:2GUJ"
FT HELIX 68..79
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 86..92
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 98..100
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 103..109
FT /evidence="ECO:0007829|PDB:2GUJ"
FT HELIX 113..117
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 129..132
FT /evidence="ECO:0007829|PDB:2GUJ"
FT STRAND 135..138
FT /evidence="ECO:0007829|PDB:2GUJ"
SQ SEQUENCE 147 AA; 16355 MW; 2912A73C716A2485 CRC64;
MALKAQNTIS GKEGRLFLDG EEMAHIKTFE ANVEKNKSEV NIMGRRMTGH KTTGANGTGT
ATFYKVTSKF VLLMMDYVKK GSDPYFTLQA VLDDQSSGRG TERVTLYDVN FDSAKIASLD
VDSEALEEEV PFTFEDFDVP EKLSDTF