XKDO_BACSU
ID XKDO_BACSU Reviewed; 1332 AA.
AC P54334;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 16-JUN-2009, sequence version 2.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Phage-like element PBSX protein XkdO;
GN Name=xkdO; OrderedLocusNames=BSU12680;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RA Krogh S., O'Reilly M., Nolan N., Devine K.M.;
RL Submitted (MAR-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP SEQUENCE REVISION TO 503 AND 590.
RX PubMed=19383706; DOI=10.1099/mic.0.027839-0;
RA Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A.,
RA Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.;
RT "From a consortium sequence to a unified sequence: the Bacillus subtilis
RT 168 reference genome a decade later.";
RL Microbiology 155:1758-1775(2009).
CC -!- SIMILARITY: To B.subtilis YqbO. {ECO:0000305}.
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DR EMBL; Z70177; CAA94037.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB13125.2; -; Genomic_DNA.
DR PIR; F69732; F69732.
DR RefSeq; NP_389150.2; NC_000964.3.
DR RefSeq; WP_010886493.1; NZ_JNCM01000035.1.
DR AlphaFoldDB; P54334; -.
DR STRING; 224308.BSU12680; -.
DR PaxDb; P54334; -.
DR PRIDE; P54334; -.
DR EnsemblBacteria; CAB13125; CAB13125; BSU_12680.
DR GeneID; 936500; -.
DR KEGG; bsu:BSU12680; -.
DR PATRIC; fig|224308.43.peg.1335; -.
DR eggNOG; COG3953; Bacteria.
DR eggNOG; COG5412; Bacteria.
DR InParanoid; P54334; -.
DR OMA; GSFMKKV; -.
DR BioCyc; BSUB:BSU12680-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR InterPro; IPR023346; Lysozyme-like_dom_sf.
DR InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR Pfam; PF01464; SLT; 1.
DR SUPFAM; SSF53955; SSF53955; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..1332
FT /note="Phage-like element PBSX protein XkdO"
FT /id="PRO_0000066028"
FT REGION 202..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 324..368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 744..771
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 744..758
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 503
FT /note="W -> S (in Ref. 1; CAA94037)"
FT /evidence="ECO:0000305"
FT CONFLICT 590
FT /note="A -> P (in Ref. 1; CAA94037)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 1332 AA; 145223 MW; 2A163E999E488FFC CRC64;
MAKLTARFDL EDKVSKKLKR IHKGFQEVEK KVKTINRQIK ISIRAEDQAF YRLRKINDYI
ILKFAKSLEI KVVLDDQVTS KLDAIERKLK RLPKETKLTV SLVDRTAAAY KKIKKMLSNQ
KLSFLLIPDD KVTSTVKRII GYIKKNLKNG YTVKLKVIDE ITKTVNRLTA LLRKFEKTYY
VKVVVKTKIS DKINKKESLI NKETSKKESD KSSDKGSDKN SDQKPGWVGK IKGWLKDWWT
KSAWPWIKDT LNEIGKAFLD RFKERLIEKL KNDVFDKIID KILGPQKKDD SGENSDTDKK
VLNRNTGGNC CCDCCEGGIS PGTKNKKTYR KKKSPTKAPN RTLKVPGEVI RRRQSGTPAE
SAPRTSGSKL KNWLGGLKSL GKDSSKLGKA FRGMGKAVPY VGSALAVFDL AGINKDNAGE
KVGSIGGRIA GAEAGATAGA EAGATIGSFV GPEGTAIGGA IGGIGGGLVG GIGGEEAGKN
IGKMFDTSKL KESISNSLFN KEWWSGKWNS ISDTANGAIT WIEDTWSKVS TWFDQYVFTP
IYNVAVPVIN FIVGLFAYAW DGILAVWNIV YPWFKDNVWD PISGAVTNVA TTIWTGLCNA
WTVISGIWST VSTWFMDNVW NPVSEAVTTA ATWIWSKIND AWTIISNIWT GVSNWFYDNV
WNPIVKKVED IKTSIKEKFD DARKFFEDAW DGIETWFNEH VKDPLVKVSE KIAEKFQWLF
DLKDSVGGFV AKVIHRGEEV THLKKKPIKK DSKEKKTSSK PTTNNIFAQS PSNNNMTVFQ
QALDQNATGG YITKPTISWI GEAGKEFVIP VDNNRGRGKM LLSQAASKLG MQVVDDMGAA
SSSGGSPASV SGGAAVSPLS GTASPVMNTA NLTGQASTLG QQFSEGFGKG ISDQPVKMED
WKKKNINTPF TQMISASPNY GKQMVSGYAK GQSGTATGTD GFLQSKVKTP FQATVSKSSS
WGTGTVKGFA QGQNSTQTGT AQYVSTHVDK PFLRSKDTSN SWGSGLIGNF VTGMNSKSSE
VKQAAKDMAK RVEQAFREEL DIHSPSRVMM SLGRFASVGV VKGLDSVDVK KYAEKQAGSL
AAAYSGMGAV GGNVKQWLMA AIMATKTPLS WLSGLMTIAQ YESGGNPNSI NLWDSNAKAG
NPSQGLMQTV PTTFNAHKAP GMGNIRNPIH NAAAAIGYIK SRYGSIDNVP GIKSLKRGGP
YVGYANGGLI TKEQIARVGE GNKREWIIPE ERGIRGRYLL QRAAQALGME VTDPSQSQQS
ELSSGQVSAV TSASRPTAAV SGSKEIYIQF NGDQHFHNGQ DAESLAAKIK QALIDELQKD
INIGTKGVVA FD