XPOT_COCIM
ID XPOT_COCIM Reviewed; 1033 AA.
AC Q1DY99; J3KEJ8;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=Exportin-T;
DE AltName: Full=Exportin(tRNA);
DE AltName: Full=Karyopherin-beta;
DE AltName: Full=tRNA exportin;
GN Name=LOS1; ORFNames=CIMG_04714;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: tRNA nucleus export receptor which facilitates tRNA
CC translocation across the nuclear pore complex. Involved in pre-tRNA
CC splicing, probably by affecting the interaction of pre-tRNA with
CC splicing endonuclease (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC Note=Shuttles between the nucleus and the cytoplasm. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the exportin family. {ECO:0000305}.
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DR EMBL; GG704914; EAS33690.3; -; Genomic_DNA.
DR RefSeq; XP_001245273.1; XM_001245272.2.
DR AlphaFoldDB; Q1DY99; -.
DR SMR; Q1DY99; -.
DR STRING; 246410.Q1DY99; -.
DR PRIDE; Q1DY99; -.
DR EnsemblFungi; EAS33690; EAS33690; CIMG_04714.
DR GeneID; 4564964; -.
DR KEGG; cim:CIMG_04714; -.
DR VEuPathDB; FungiDB:CIMG_04714; -.
DR InParanoid; Q1DY99; -.
DR OMA; RFSPLCW; -.
DR OrthoDB; 142520at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0071528; P:tRNA re-export from nucleus; IEA:InterPro.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR013598; Exportin-1/Importin-b-like.
DR InterPro; IPR045546; Exportin-T_C.
DR InterPro; IPR040017; XPOT.
DR PANTHER; PTHR15952; PTHR15952; 1.
DR Pfam; PF19282; Exportin-T; 1.
DR Pfam; PF08389; Xpo1; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Nucleus; Reference proteome; RNA-binding; Transport;
KW tRNA processing; tRNA-binding.
FT CHAIN 1..1033
FT /note="Exportin-T"
FT /id="PRO_0000343089"
SQ SEQUENCE 1033 AA; 116194 MW; 7DDA384E5D0FBA9A CRC64;
MEEQVANAIE IAGNPSSDQT IKAQAFDYLN QLRADPSGWQ VCLSLFTKTP RRSDVVRHVA
LEIINSATQT GLVDIQGLSF IKDNLLTYLQ QMYGPDGAAQ SDPSNIQNKI AQTITYLFSA
LYATEWNTFF DDILRLTYNG PDSGVRDNTL GIIFYLRVIN SIHDEIGDVL VSRSRAEQDR
ANILKDLIRE RDVQKLVTSW QDILSQWQER NDLIAEMCLR AIGSWVSWIN ISLVVNQTML
DLLFRQLARV KDVDLHQGGE KVRDAAIDVF TEIVGKKMKP ADKIDMIVYL NLESIVAQLT
ASPPLHEHRF TSKYDTDLAE TVTKLVNITT VDIVKALDSE DADNATKEKA EALLQAFLPH
ILRYFSDEYD EICSTAIPCV NELLSYLRKV AKRNPAIIPQ QSAMLLPILK AIIQKMRYDE
TSSWGTEDDQ MDEMEFQDLR KRLNVLQQII ASTNEQLYMD AVSEVVRATF HNVRQSGGQI
DWRDLDLALH EMFLFGELAV RCGGLYTKNK PNNPASERLI EMMLMMVESD IRSFRHPATQ
LQFMEICVRY SSFFEHHARF IPGVLEGFLQ LAHHQMTKVK VRSWYLFHRL VKHLRNYIGN
VAQTVIAALG DLLTINAEVP VEGPDGDDMS SEDHEGSADA LFNNQLYLFE AIGTICSTSS
VPLDKQVVYA QSIMNPIFID MERNLGAAKS HDERALLQIH HDIMALGTLA KGFSDWIPGT
SSPAVPPAPE ISEAFGQVAE ATLVALESLK FSFSIRTAAR AAFSRLIGVR GSHNLPQLPR
WIDGLLTQTS SKDEMALFLR LLDQVIFGFK TEIYGILDTL LTPFLQRVFA GISEPTTGTD
DEIQLAELKR EYLNFLLMIL NNDLGTVIIS TTNQPIFETV ITTIEHFAKD VDDFPTAKMA
FLVLSRMSNL WGGPDVVQPS NPANGTTPSQ SALPGFTQFM ITRFSPLCWA LPMNPSFNPK
DAQAKQVLGE AAALQKIIYL KTGPEYVRWL RETELPGMGM GPDLVNEYVG SLEMLDIKGF
RQFFQAFIQR FSA