XYLA_HORVU
ID XYLA_HORVU Reviewed; 479 AA.
AC Q40082; Q40081;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Xylose isomerase;
DE EC=5.3.1.5;
GN Name=XYLA;
OS Hordeum vulgare (Barley).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
OX NCBI_TaxID=4513;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], PARTIAL PROTEIN SEQUENCE, AND
RP CHARACTERIZATION.
RC STRAIN=cv. Himalaya;
RX PubMed=8620879; DOI=10.1111/j.1432-1033.1996.0240n.x;
RA Kristo P.A., Saarelainen R., Fagerstroem R., Aho S., Korhola M.;
RT "Protein purification, and cloning and characterization of the cDNA and
RT gene for xylose isomerase of barley.";
RL Eur. J. Biochem. 237:240-246(1996).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=alpha-D-xylose = alpha-D-xylulofuranose; Xref=Rhea:RHEA:22816,
CC ChEBI:CHEBI:28518, ChEBI:CHEBI:188998; EC=5.3.1.5;
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Note=Binds 2 manganese ions per subunit.;
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC pH dependence:
CC Optimum pH is 7.0-9.0.;
CC Temperature dependence:
CC Optimum temperature is 60 degrees Celsius.;
CC -!- SUBUNIT: Homodimer.
CC -!- SIMILARITY: Belongs to the xylose isomerase family. {ECO:0000305}.
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DR EMBL; X95257; CAA64545.1; -; mRNA.
DR EMBL; X95256; CAA64544.1; -; Genomic_DNA.
DR PIR; S65466; S65466.
DR AlphaFoldDB; Q40082; -.
DR SMR; Q40082; -.
DR ExpressionAtlas; Q40082; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009045; F:xylose isomerase activity; IEA:UniProtKB-EC.
DR GO; GO:0042732; P:D-xylose metabolic process; IEA:UniProtKB-KW.
DR HAMAP; MF_00455; Xylose_isom_A; 1.
DR InterPro; IPR036237; Xyl_isomerase-like_sf.
DR InterPro; IPR013022; Xyl_isomerase-like_TIM-brl.
DR InterPro; IPR013452; Xylose_isom_bac.
DR InterPro; IPR001998; Xylose_isomerase.
DR Pfam; PF01261; AP_endonuc_2; 1.
DR PRINTS; PR00688; XYLOSISMRASE.
DR SUPFAM; SSF51658; SSF51658; 1.
DR TIGRFAMs; TIGR02630; xylose_isom_A; 1.
DR PROSITE; PS51415; XYLOSE_ISOMERASE; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Direct protein sequencing; Isomerase; Magnesium;
KW Manganese; Metal-binding; Xylose metabolism.
FT CHAIN 1..479
FT /note="Xylose isomerase"
FT /id="PRO_0000195825"
FT ACT_SITE 144
FT /evidence="ECO:0000250"
FT BINDING 275
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 311
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 311
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 314
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 339
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 350
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 352
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 382
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT CONFLICT 443..468
FT /note="AGKGDFETLEKKALEWGEPTVPSGKQ -> GSSSFTAQCKYISAPMIVPYDL
FT LLPA (in Ref. 1; CAA64544)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 479 AA; 53614 MW; 57E6033AFD77A33F CRC64;
MKGGELLVLL LASSLCLSAA VAAQETCPAD IGAKCTDAAS DDWEGEFFPG IDKINYEGPT
SKKPLSYKWY NAEEVILGKK MKDWFRFSVA FWHTFRGTGG DPFGAPTKNW PWEDGTNSLA
MAKRRMKAHF EFMEKLGVER WCFHDRDIAP DGKTLAETNA NLDEIVELAK QLQSETNIKP
LWGTAQLFMH PRYMHGAATS PEVKVYAYAA AQVKKALEVT HYLGGENYVF WGGREGYQTL
LNTDMKRELE HLANFLQAAV NHKKKIGFNG TLLIEPKPQE PTKHQYDWDV ATTFSFLQKF
GLTGEFKINV ECNHATLSGH SCHHELETAR INDILGNIDA NTGDPQVGWD TDEFLTDISE
ATLIMSSVVK NDGLAPGGFN FYAKLRREST DVEDLFIAHI SGMDTMARGR RNVVKLIEDG
SLDELVRKRY QSFDTEIGAM IEAGKGDFET LEKKALEWGE PTVPSGKQEL AEMLFQSAL