CAPB_PSESM
ID CAPB_PSESM Reviewed; 69 AA.
AC P0A105; P72189; P80415;
DT 01-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Cold shock protein CapB;
DE AltName: Full=Cold acclimation protein B;
GN Name=capB; OrderedLocusNames=PSPTO_4145;
OS Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=223283;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-871 / DC3000;
RX PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C.,
RA Davidsen T.M., Zafar N., Zhou L., Liu J., Yuan Q., Khouri H.M.,
RA Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R.,
RA Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R.,
RA Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G.,
RA Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M.,
RA Collmer A.;
RT "The complete genome sequence of the Arabidopsis and tomato pathogen
RT Pseudomonas syringae pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC -!- FUNCTION: Affects cell viability at low temperatures. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
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DR EMBL; AE016853; AAO57601.1; -; Genomic_DNA.
DR RefSeq; NP_793906.1; NC_004578.1.
DR RefSeq; WP_002554837.1; NC_004578.1.
DR AlphaFoldDB; P0A105; -.
DR SMR; P0A105; -.
DR EnsemblBacteria; AAO57601; AAO57601; PSPTO_4145.
DR GeneID; 61879477; -.
DR GeneID; 64467183; -.
DR GeneID; 67382191; -.
DR KEGG; pst:PSPTO_4145; -.
DR PATRIC; fig|223283.9.peg.4255; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_6_1_6; -.
DR OMA; APVREND; -.
DR OrthoDB; 2034748at2; -.
DR PhylomeDB; P0A105; -.
DR PRO; PR:P0A105; -.
DR Proteomes; UP000002515; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 3: Inferred from homology;
KW Activator; Cytoplasm; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..69
FT /note="Cold shock protein CapB"
FT /id="PRO_0000100319"
FT DOMAIN 7..66
FT /note="CSD"
SQ SEQUENCE 69 AA; 7727 MW; 659F8F3EF217678B CRC64;
MSNRQTGTVK WFNDEKGFGF ITPQSGDDLF VHFKAIQSDG FKSLKEGQQV SFIATRGQKG
MQAEEVQVI