XYNB_CELJU
ID XYNB_CELJU Reviewed; 599 AA.
AC P23030; B3PEH8;
DT 01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
DT 20-APR-2010, sequence version 2.
DT 25-MAY-2022, entry version 133.
DE RecName: Full=Endo-1,4-beta-xylanase B;
DE Short=Xylanase B;
DE EC=3.2.1.8;
DE AltName: Full=1,4-beta-D-xylan xylanohydrolase B;
DE Flags: Precursor;
GN Name=xynB; Synonyms=xyn10B; OrderedLocusNames=CJA_3280;
OS Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.
OS cellulosa).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales;
OC Cellvibrionaceae; Cellvibrio.
OX NCBI_TaxID=498211;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 38-46.
RX PubMed=2125205; DOI=10.1042/bj2720369;
RA Kellett L.E., Poole D.M., Ferreira L.M.A., Durrant A.J., Hazlewood G.P.,
RA Gilbert H.J.;
RT "Xylanase B and an arabinofuranosidase from Pseudomonas fluorescens subsp.
RT cellulosa contain identical cellulose-binding domains and are encoded by
RT adjacent genes.";
RL Biochem. J. 272:369-376(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ueda107;
RX PubMed=18556790; DOI=10.1128/jb.01701-07;
RA DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H.,
RA Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J.,
RA Nelson K.E.;
RT "Insights into plant cell wall degradation from the genome sequence of the
RT soil bacterium Cellvibrio japonicus.";
RL J. Bacteriol. 190:5455-5463(2008).
CC -!- FUNCTION: Xylanase B contributes to hydrolyze hemicellulose, the major
CC component of plant cell-walls.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.;
CC EC=3.2.1.8;
CC -!- PATHWAY: Glycan metabolism; hemicellulose degradation.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
CC {ECO:0000305}.
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DR EMBL; X54523; CAA38389.1; -; Genomic_DNA.
DR EMBL; CP000934; ACE84499.1; -; Genomic_DNA.
DR RefSeq; WP_012488856.1; NC_010995.1.
DR AlphaFoldDB; P23030; -.
DR SMR; P23030; -.
DR STRING; 498211.CJA_3280; -.
DR CAZy; CBM2; Carbohydrate-Binding Module Family 2.
DR CAZy; CBM35; Carbohydrate-Binding Module Family 35.
DR CAZy; GH10; Glycoside Hydrolase Family 10.
DR PRIDE; P23030; -.
DR EnsemblBacteria; ACE84499; ACE84499; CJA_3280.
DR KEGG; cja:CJA_3280; -.
DR eggNOG; COG3693; Bacteria.
DR HOGENOM; CLU_029617_0_0_6; -.
DR OrthoDB; 593041at2; -.
DR UniPathway; UPA00697; -.
DR Proteomes; UP000001036; Chromosome.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProtKB-EC.
DR GO; GO:0030247; F:polysaccharide binding; IEA:InterPro.
DR GO; GO:0030245; P:cellulose catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0045493; P:xylan catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.290; -; 1.
DR InterPro; IPR001919; CBD2.
DR InterPro; IPR008965; CBM2/CBM3_carb-bd_dom_sf.
DR InterPro; IPR012291; CBM2_carb-bd_dom_sf.
DR InterPro; IPR018366; CBM2_CS.
DR InterPro; IPR005084; CMB_fam6.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR044846; GH10.
DR InterPro; IPR031158; GH10_AS.
DR InterPro; IPR001000; GH10_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR31490; PTHR31490; 1.
DR Pfam; PF00553; CBM_2; 1.
DR Pfam; PF03422; CBM_6; 1.
DR Pfam; PF00331; Glyco_hydro_10; 1.
DR PRINTS; PR00134; GLHYDRLASE10.
DR SMART; SM00637; CBD_II; 1.
DR SMART; SM00633; Glyco_10; 1.
DR SUPFAM; SSF49384; SSF49384; 1.
DR SUPFAM; SSF49785; SSF49785; 1.
DR SUPFAM; SSF51445; SSF51445; 1.
DR PROSITE; PS51173; CBM2; 1.
DR PROSITE; PS00561; CBM2_A; 1.
DR PROSITE; PS51175; CBM6; 1.
DR PROSITE; PS00591; GH10_1; 1.
DR PROSITE; PS51760; GH10_2; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Cellulose degradation; Direct protein sequencing;
KW Disulfide bond; Glycosidase; Hydrolase; Polysaccharide degradation;
KW Reference proteome; Signal; Xylan degradation.
FT SIGNAL 1..37
FT /evidence="ECO:0000269|PubMed:2125205"
FT CHAIN 38..599
FT /note="Endo-1,4-beta-xylanase B"
FT /id="PRO_0000007978"
FT DOMAIN 38..136
FT /note="CBM2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01135"
FT DOMAIN 163..289
FT /note="CBM6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00523"
FT DOMAIN 315..595
FT /note="GH10"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01096"
FT ACT_SITE 431
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT ACT_SITE 530
FT /note="Nucleophile"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10061"
FT DISULFID 39..133
FT /evidence="ECO:0000250"
FT CONFLICT 563..598
FT /note="LWGYVVGRTWIEGSGLIQDNGTPRPAMTWLINNYLN -> SGICGGQDLDRR
FT LRFDPGQWHTAPGNDVVD (in Ref. 1; CAA38389)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 599 AA; 64363 MW; D2DE51E5FD4B33E5 CRC64;
MTISASDYRH PGNFLKRTTA LLCVGTALTA LAFNASAACT YTIDSEWSTG FTANITLKND
TGAAINNWNV NWQYSSNRMT SGWNANFSGT NPYNATNMSW NGSIAPGQSI SFGLQGEKNG
STAERPTVTG AACNSATTSS VASSSSTPTT SSSSASSVAS ALLLQEAQAG FCRVDGTIDN
NHTGFTGSGF ANTNNAQGAA VVWAIDATSS GRRTLTIRYA NGGTANRNGS LVINGGSNGN
YTVSLPTTGA WTTWQTATID VDLVQGNNIV QLSATTAEGL PNIDSLSVVG GTVRAGNCGS
VSSSSSVQSS SSSSSSSAAS AKKFIGNITT SGAVRSDFTR YWNQITPENE SKWGSVEGTR
NVYNWAPLDR IYAYARQNNI PVKAHTFVWG AQSPSWLNNL SGPEVAVEIE QWIRDYCARY
PDTAMIDVVN EAVPGHQPAG YAQRAFGNNW IQRVFQLARQ YCPNSILILN DYNNIRWQHN
EFIALAKAQG NYIDAVGLQA HELKGMTAAQ VKTAIDNIWN QVGKPIYISE YDIGDTNDQV
QLQNFQAHFP VFYNHPHVHG ITLWGYVVGR TWIEGSGLIQ DNGTPRPAMT WLINNYLNQ