XYNB_STRSQ
ID XYNB_STRSQ Reviewed; 340 AA.
AC D7EZJ3;
DT 13-NOV-2013, integrated into UniProtKB/Swiss-Prot.
DT 10-AUG-2010, sequence version 1.
DT 25-MAY-2022, entry version 37.
DE RecName: Full=Endo-1,4-beta-xylanase B;
DE Short=Xylanase B;
DE EC=3.2.1.8;
DE Flags: Precursor;
GN Name=xynBS9;
OS Streptomyces sp.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1931;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, CATALYTIC ACTIVITY,
RP BIOPHYSICOCHEMICAL PROPERTIES, ACTIVITY REGULATION, AND SUBCELLULAR
RP LOCATION.
RC STRAIN=S9;
RA Yao G., Li N., Wang Y., Shi P., Chen Q., Yao B.;
RT "Cloning, expression, and characterization of a xylanase gene, xynBS9, from
RT Streptomyces sp. S9.";
RL J. Agric. Sci. Technol. (Beijing) 11:64-70(2009).
CC -!- FUNCTION: Endo-acting xylanase which specifically cleaves internal
CC linkages on the xylan backbone, releasing xylooligosaccharides. Is able
CC to hydrolyze oat spelt xylan and birchwood xylan, releasing xylobiose
CC and xylotriose as the major products. {ECO:0000269|Ref.1}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.;
CC EC=3.2.1.8; Evidence={ECO:0000269|Ref.1};
CC -!- ACTIVITY REGULATION: Is inhibited by Ag(+) and Hg(2+) in vitro. EDTA
CC and other metal cations such as Na(+), K(+), Ca(2+), Cu(2+), Mg(2+),
CC Fe(3+), and Zn(2+) have no effect on catalytic activity.
CC {ECO:0000269|Ref.1}.
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC Vmax=3741 umol/min/mg enzyme with oat spelt xylan as substrate (at pH
CC 6.5 and 60 degrees Celsius) {ECO:0000269|Ref.1};
CC Vmax=2320 umol/min/mg enzyme with birchwood xylan as substrate (at pH
CC 6.5 and 60 degrees Celsius) {ECO:0000269|Ref.1};
CC pH dependence:
CC Optimum pH is 6-7. {ECO:0000269|Ref.1};
CC Temperature dependence:
CC Optimum temperature is 60 degrees Celsius. {ECO:0000269|Ref.1};
CC -!- PATHWAY: Glycan degradation; xylan degradation.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|Ref.1}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 11 (cellulase G) family.
CC {ECO:0000305}.
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DR EMBL; EU660499; ACF57947.1; -; Genomic_DNA.
DR AlphaFoldDB; D7EZJ3; -.
DR SMR; D7EZJ3; -.
DR CAZy; CBM2; Carbohydrate-Binding Module Family 2.
DR CAZy; GH11; Glycoside Hydrolase Family 11.
DR UniPathway; UPA00114; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProtKB-EC.
DR GO; GO:0030247; F:polysaccharide binding; IEA:InterPro.
DR GO; GO:0045493; P:xylan catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.60.120.180; -; 1.
DR Gene3D; 2.60.40.290; -; 1.
DR InterPro; IPR001919; CBD2.
DR InterPro; IPR008965; CBM2/CBM3_carb-bd_dom_sf.
DR InterPro; IPR012291; CBM2_carb-bd_dom_sf.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR013319; GH11/12.
DR InterPro; IPR018208; GH11_AS_1.
DR InterPro; IPR033119; GH11_AS_2.
DR InterPro; IPR033123; GH11_dom.
DR InterPro; IPR001137; Glyco_hydro_11.
DR Pfam; PF00457; Glyco_hydro_11; 1.
DR PRINTS; PR00911; GLHYDRLASE11.
DR SMART; SM00637; CBD_II; 1.
DR SUPFAM; SSF49384; SSF49384; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR PROSITE; PS51173; CBM2; 1.
DR PROSITE; PS00776; GH11_1; 1.
DR PROSITE; PS00777; GH11_2; 1.
DR PROSITE; PS51761; GH11_3; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Glycosidase; Hydrolase;
KW Polysaccharide degradation; Secreted; Signal; Xylan degradation.
FT SIGNAL 1..52
FT /evidence="ECO:0000255"
FT CHAIN 53..340
FT /note="Endo-1,4-beta-xylanase B"
FT /id="PRO_0000424417"
FT DOMAIN 54..239
FT /note="GH11"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01097"
FT DOMAIN 248..340
FT /note="CBM2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01135"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 138
FT /note="Nucleophile"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10062"
FT ACT_SITE 227
FT /note="Proton donor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10063"
SQ SEQUENCE 340 AA; 36245 MW; 84EBAF44059CCCB3 CRC64;
MHDAPAQRKR RRPGRIGPLP RSSRFARLKL LIASACAALL ATLALPPGAA HAQTVTSNQT
GNHNGYFYSF WTDAPGTVSA TMGSGGNYST SWRNTGNFVI GKGWSTGGRR TVTYSGSFNP
SGNAYLTLYG WSRNPLVEYY IVDNWGTYRP TGTFKGTVTT DGGTYDIYQT TRYNAPSIEG
NKTFNQYWSV RQQKRTGGTI TTGNHFDAWA RAGMQLGSHD YMIMATEGYQ SSGSSNITVG
GTSGGGGGGG GGGGCTATLS AGERWDDRYN LNVSVSGSSN WTVTMNVPSP ATILSTWNIT
ATWPSSQVLV ARPNGSGNNF GVTIKHNGNW TWPTVSCSTG