XYS20_NEOPA
ID XYS20_NEOPA Reviewed; 335 AA.
AC A8TGA1;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 25-MAY-2022, entry version 48.
DE RecName: Full=Endo-1,4-beta-xylanase S20;
DE Short=Xylanase S20;
DE EC=3.2.1.8;
DE AltName: Full=1,4-beta-D-xylan xylanohydrolase S20;
DE Flags: Precursor;
GN Name=xynS20;
OS Neocallimastix patriciarum (Rumen fungus).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Neocallimastigomycetes; Neocallimastigales;
OC Neocallimastigaceae; Neocallimastix.
OX NCBI_TaxID=4758;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, FUNCTION, CATALYTIC
RP ACTIVITY, AND BIOPHISICOCHEMICAL PROPERTIES.
RC STRAIN=S20;
RX PubMed=18415096; DOI=10.1007/s00253-008-1418-1;
RA Liu J.R., Duan C.H., Zhao X., Tzen J.T., Cheng K.J., Pai C.K.;
RT "Cloning of a rumen fungal xylanase gene and purification of the
RT recombinant enzyme via artificial oil bodies.";
RL Appl. Microbiol. Biotechnol. 79:225-233(2008).
CC -!- FUNCTION: Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a
CC major structural heterogeneous polysaccharide found in plant biomass
CC representing the second most abundant polysaccharide in the biosphere,
CC after cellulose. {ECO:0000269|PubMed:18415096}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.;
CC EC=3.2.1.8; Evidence={ECO:0000269|PubMed:18415096};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=4.9 mg/ml for oat spelt xylan;
CC Vmax=3.886 umol/min/mg enzyme toward oat spelt xylan;
CC pH dependence:
CC Optimum pH is 6.0.;
CC Temperature dependence:
CC Optimum temperature is 45 degrees Celsius.;
CC -!- PATHWAY: Glycan degradation; xylan degradation.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:18415096}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 11 (cellulase G) family.
CC {ECO:0000305}.
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DR EMBL; EU030626; ABW04217.1; -; mRNA.
DR AlphaFoldDB; A8TGA1; -.
DR SMR; A8TGA1; -.
DR CAZy; CBM1; Carbohydrate-Binding Module Family 1.
DR CAZy; GH11; Glycoside Hydrolase Family 11.
DR CLAE; XYN11B_NEOPA; -.
DR BRENDA; 3.2.1.8; 6834.
DR UniPathway; UPA00114; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0030248; F:cellulose binding; IEA:InterPro.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProtKB-EC.
DR GO; GO:0045493; P:xylan catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.60.120.180; -; 1.
DR InterPro; IPR035971; CBD_sf.
DR InterPro; IPR000254; Cellulose-bd_dom_fun.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR013319; GH11/12.
DR InterPro; IPR018208; GH11_AS_1.
DR InterPro; IPR033123; GH11_dom.
DR InterPro; IPR001137; Glyco_hydro_11.
DR Pfam; PF00734; CBM_1; 1.
DR Pfam; PF00457; Glyco_hydro_11; 1.
DR PRINTS; PR00911; GLHYDRLASE11.
DR SMART; SM00236; fCBD; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR SUPFAM; SSF57180; SSF57180; 1.
DR PROSITE; PS00562; CBM1_1; 1.
DR PROSITE; PS51164; CBM1_2; 1.
DR PROSITE; PS00776; GH11_1; 1.
DR PROSITE; PS51761; GH11_3; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Glycoprotein; Glycosidase; Hydrolase;
KW Polysaccharide degradation; Secreted; Signal; Xylan degradation.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..335
FT /note="Endo-1,4-beta-xylanase S20"
FT /id="PRO_0000429664"
FT DOMAIN 39..241
FT /note="GH11"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01097"
FT DOMAIN 300..335
FT /note="CBM1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00597"
FT REGION 251..291
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 134
FT /note="Nucleophile"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10062"
FT ACT_SITE 228
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT CARBOHYD 42
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 78
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 202
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 251
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 335 AA; 36094 MW; 5F2B450DA1CA8D34 CRC64;
MLRKLVTGAL AAALLLSGQS NAQNACQQTQ QLSGGRTINN KNETGNGNGN YKYEIWRDGN
GGSLTLYPKD AAFKASWNNS GDFLGRVGLT FNKPAATNLG GDLIANYNYK KSGSDGGTYS
YIGIYGWMDN PQIEYYVVDD WMHNRGAPGG SYMGSQKGTI TVDGGTYKVW SGQRTGASKW
GTSTFTQIFS IRTSPRQCGS INVSEHFRQW QKLGLRLGGL MEAQLLAESG GGSGYVDFTY
ATITIGGSSS NASAPSNNNN NNNNNNDNNG NWNNWNNNNN NNNNNNNNNN NNNNNQGGGN
CAAIWGQCGG SGYNGPKCCK QGSCKQINQW YSQCQ