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Y020_PROMP
ID   Y020_PROMP              Reviewed;         116 AA.
AC   Q7V3Q0;
DT   10-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2003, sequence version 1.
DT   25-MAY-2022, entry version 91.
DE   RecName: Full=Nucleoid-associated protein PMM0020 {ECO:0000255|HAMAP-Rule:MF_00274};
GN   OrderedLocusNames=PMM0020;
OS   Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 /
OS   MED4).
OC   Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC   Prochlorococcus.
OX   NCBI_TaxID=59919;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1986 / NIES-2087 / MED4;
RX   PubMed=12917642; DOI=10.1038/nature01947;
RA   Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A.,
RA   Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L.,
RA   Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C.,
RA   Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R.,
RA   Chisholm S.W.;
RT   "Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche
RT   differentiation.";
RL   Nature 424:1042-1047(2003).
CC   -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC       regulation of gene expression, nucleoid organization and DNA
CC       protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
CC   -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
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DR   EMBL; BX548174; CAE18479.1; -; Genomic_DNA.
DR   RefSeq; WP_011131658.1; NC_005072.1.
DR   AlphaFoldDB; Q7V3Q0; -.
DR   SMR; Q7V3Q0; -.
DR   STRING; 59919.PMM0020; -.
DR   EnsemblBacteria; CAE18479; CAE18479; PMM0020.
DR   KEGG; pmm:PMM0020; -.
DR   eggNOG; COG0718; Bacteria.
DR   HOGENOM; CLU_140930_0_1_3; -.
DR   OMA; VWISGNQ; -.
DR   OrthoDB; 1883809at2; -.
DR   Proteomes; UP000001026; Chromosome.
DR   GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1310.10; -; 1.
DR   HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR   InterPro; IPR036894; YbaB-like_sf.
DR   InterPro; IPR004401; YbaB/EbfC.
DR   PANTHER; PTHR33449; PTHR33449; 1.
DR   Pfam; PF02575; YbaB_DNA_bd; 1.
DR   PIRSF; PIRSF004555; UCP004555; 1.
DR   SUPFAM; SSF82607; SSF82607; 1.
DR   TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; DNA-binding.
FT   CHAIN           1..116
FT                   /note="Nucleoid-associated protein PMM0020"
FT                   /id="PRO_0000170422"
FT   REGION          87..116
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   116 AA;  12949 MW;  F42FAFCB75F01E7E CRC64;
     MAGFGLPNFG QLTEAFKKAK EIQQNAQKLQ DELESMEIEG KSDDEMIKVW ISGNQLPLRV
     EVNENISTAN KEEIEKNILE AIKKAHESST TTMKERMNDL TGGLNLNLPG LDNNDS
 
 
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