Y038_ALKCK
ID Y038_ALKCK Reviewed; 105 AA.
AC Q5WLZ4;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=Nucleoid-associated protein ABC0038 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=ABC0038;
OS Alkalihalobacillus clausii (strain KSM-K16) (Bacillus clausii).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alkalihalobacillus.
OX NCBI_TaxID=66692;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSM-K16;
RA Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y.,
RA Kawai S., Ito S., Horikoshi K.;
RT "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-
RT K16.";
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
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DR EMBL; AP006627; BAD62581.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5WLZ4; -.
DR SMR; Q5WLZ4; -.
DR STRING; 66692.ABC0038; -.
DR EnsemblBacteria; BAD62581; BAD62581; ABC0038.
DR KEGG; bcl:ABC0038; -.
DR eggNOG; COG0718; Bacteria.
DR HOGENOM; CLU_140930_1_0_9; -.
DR OMA; MGNMMKQ; -.
DR Proteomes; UP000001168; Chromosome.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Reference proteome.
FT CHAIN 1..105
FT /note="Nucleoid-associated protein ABC0038"
FT /id="PRO_1000071912"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 105 AA; 11740 MW; E663599D7CC29EDF CRC64;
MEMKNMGNMM KQMQKMQKQM MKAQEELKEK TVEATVGGGM VTVIASGDKR ILEVNISEDV
VDPDDVEMLQ DLIIAATNEA LKKVDELVEQ DLGKFTKGLN MPGMF