ID   Y086_RHOPS              Reviewed;         106 AA.
AC   Q13F13;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   31-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 78.
DE   RecName: Full=Nucleoid-associated protein RPD_0086 {ECO:0000255|HAMAP-Rule:MF_00274};
GN   OrderedLocusNames=RPD_0086;
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S.,
RA   Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC       regulation of gene expression, nucleoid organization and DNA
CC       protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
CC   -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
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DR   EMBL; CP000283; ABE37326.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q13F13; -.
DR   SMR; Q13F13; -.
DR   STRING; 316057.RPD_0086; -.
DR   EnsemblBacteria; ABE37326; ABE37326; RPD_0086.
DR   KEGG; rpd:RPD_0086; -.
DR   eggNOG; COG0718; Bacteria.
DR   HOGENOM; CLU_140930_0_1_5; -.
DR   OMA; MGNMMKQ; -.
DR   OrthoDB; 1883809at2; -.
DR   BioCyc; RPAL316057:RPD_RS00430-MON; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1310.10; -; 1.
DR   HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR   InterPro; IPR036894; YbaB-like_sf.
DR   InterPro; IPR004401; YbaB/EbfC.
DR   PANTHER; PTHR33449; PTHR33449; 1.
DR   Pfam; PF02575; YbaB_DNA_bd; 1.
DR   PIRSF; PIRSF004555; UCP004555; 1.
DR   SUPFAM; SSF82607; SSF82607; 1.
DR   TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; DNA-binding.
FT   CHAIN           1..106
FT                   /note="Nucleoid-associated protein RPD_0086"
FT                   /id="PRO_1000003811"
SQ   SEQUENCE   106 AA;  11045 MW;  7E8C7B355DEF7F15 CRC64;
     MADFLGMMKQ AAQLQSKMKA MQAELDQIEV EGSSGGGLVQ VRMSAKMEVR GVSIDPSLLK
     PDEGGVLEDL LVAAHADAHR KAEAAMQEKM QALTGGLGLP PGLGLG