Y1015_ARATH
ID Y1015_ARATH Reviewed; 327 AA.
AC Q8GUH2; O03988; O23703; Q8L9M0; Q9LMM9;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 95.
DE RecName: Full=Uncharacterized protein At1g01500;
GN OrderedLocusNames=At1g01500; ORFNames=F22L4.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND NUCLEOTIDE SEQUENCE [MRNA] OF
RP 43-319.
RC STRAIN=cv. Columbia;
RX PubMed=9666060; DOI=10.1016/s0378-1119(98)00286-8;
RA Terryn N., Gielen J., De Keyser A., Van Den Daele H., Ardiles W., Neyt P.,
RA De Clercq R., Coppieters J., Dehais P., Villarroel R., Rouze P.,
RA van Montagu M.;
RT "Sequence analysis of a 40-kb Arabidopsis thaliana genomic region located
RT at the top of chromosome 1.";
RL Gene 215:11-17(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF81310.1; Type=Erroneous gene model prediction; Note=The predicted gene At1g01510 has been split into 3 genes: At1g01500, At1g01510 and At1g01520.; Evidence={ECO:0000305};
CC Sequence=CAA73308.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA73308.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; Y10087; CAA71176.1; -; mRNA.
DR EMBL; Y12776; CAA73308.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC061957; AAF81310.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27297.1; -; Genomic_DNA.
DR EMBL; BT002511; AAO00871.1; -; mRNA.
DR EMBL; BT008724; AAP42737.1; -; mRNA.
DR EMBL; AK227140; BAE99186.1; -; mRNA.
DR EMBL; AY088357; AAM65896.1; -; mRNA.
DR RefSeq; NP_563628.1; NM_100032.4.
DR AlphaFoldDB; Q8GUH2; -.
DR BioGRID; 24665; 1.
DR IntAct; Q8GUH2; 1.
DR STRING; 3702.AT1G01500.1; -.
DR PaxDb; Q8GUH2; -.
DR PRIDE; Q8GUH2; -.
DR ProteomicsDB; 242561; -.
DR EnsemblPlants; AT1G01500.1; AT1G01500.1; AT1G01500.
DR GeneID; 839430; -.
DR Gramene; AT1G01500.1; AT1G01500.1; AT1G01500.
DR KEGG; ath:AT1G01500; -.
DR Araport; AT1G01500; -.
DR TAIR; locus:2025401; AT1G01500.
DR eggNOG; ENOG502QRIR; Eukaryota.
DR HOGENOM; CLU_080009_0_0_1; -.
DR InParanoid; Q8GUH2; -.
DR OMA; DMYTGED; -.
DR OrthoDB; 1230056at2759; -.
DR PhylomeDB; Q8GUH2; -.
DR PRO; PR:Q8GUH2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8GUH2; baseline and differential.
DR Genevisible; Q8GUH2; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0004617; F:phosphoglycerate dehydrogenase activity; IBA:GO_Central.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..327
FT /note="Uncharacterized protein At1g01500"
FT /id="PRO_0000408480"
FT TRANSMEM 183..203
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 292..312
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 12..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 175
FT /note="V -> A (in Ref. 6; AAM65896)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 327 AA; 35926 MW; B7960DBE23A71205 CRC64;
MISKDHLHHL DPLGTTKSYH MNTSTVSPPS PASSISLSQS AWLEVRLFYV RIAPCVVENV
PDFLTLRHPR RETGASLEVN GVRVPSSQTA SLKLRRDRVD RESSEVTYVS TETVRVTGCV
DFEVYDNEDM VLCGNLDRIE GAWNNGTVSD PKTGWGMDCY IAMGNGHVSG PSASVFFQPK
FGVSSPSVEV YIAGCCGGVP VILTKTIQAS PRRKVARHVT LDAIPEDEEV GKEQDIGTIG
DELARQSKVQ MMESEVDEYD DSDMKMAQRY YPEGMYVDED GQLSWFNAGV RVGVGIGLGM
CLGVGIGVGL LMRSYQATTS NLRRRFL
