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Y1049_ARATH
ID   Y1049_ARATH             Reviewed;         488 AA.
AC   Q9MAU5; Q8LAL8;
DT   22-FEB-2012, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 122.
DE   RecName: Full=Putative BPI/LBP family protein At1g04970;
DE   Flags: Precursor;
GN   OrderedLocusNames=At1g04970; ORFNames=F13M7.4;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=1;
CC         Comment=A number of isoforms are produced. According to EST
CC         sequences.;
CC       Name=1;
CC         IsoId=Q9MAU5-1; Sequence=Displayed;
CC   -!- SIMILARITY: Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP (TC
CC       1.C.40) family. {ECO:0000305}.
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DR   EMBL; AC004809; AAF40464.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE27771.1; -; Genomic_DNA.
DR   EMBL; BT004276; AAO42277.1; -; mRNA.
DR   EMBL; BT005587; AAO64007.1; -; mRNA.
DR   EMBL; AY087735; AAM65272.1; -; mRNA.
DR   PIR; C86183; C86183.
DR   RefSeq; NP_563724.1; NM_100375.4. [Q9MAU5-1]
DR   AlphaFoldDB; Q9MAU5; -.
DR   SMR; Q9MAU5; -.
DR   BioGRID; 24592; 2.
DR   IntAct; Q9MAU5; 2.
DR   STRING; 3702.AT1G04970.1; -.
DR   PaxDb; Q9MAU5; -.
DR   PRIDE; Q9MAU5; -.
DR   ProteomicsDB; 243175; -. [Q9MAU5-1]
DR   DNASU; 839357; -.
DR   EnsemblPlants; AT1G04970.1; AT1G04970.1; AT1G04970. [Q9MAU5-1]
DR   GeneID; 839357; -.
DR   Gramene; AT1G04970.1; AT1G04970.1; AT1G04970. [Q9MAU5-1]
DR   KEGG; ath:AT1G04970; -.
DR   Araport; AT1G04970; -.
DR   TAIR; locus:2010592; AT1G04970.
DR   eggNOG; KOG4160; Eukaryota.
DR   HOGENOM; CLU_028970_0_0_1; -.
DR   InParanoid; Q9MAU5; -.
DR   OMA; VGWLIRL; -.
DR   OrthoDB; 1242894at2759; -.
DR   PhylomeDB; Q9MAU5; -.
DR   PRO; PR:Q9MAU5; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9MAU5; baseline and differential.
DR   Genevisible; Q9MAU5; AT.
DR   GO; GO:0005615; C:extracellular space; IEA:InterPro.
DR   GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR   GO; GO:0001530; F:lipopolysaccharide binding; IDA:TAIR.
DR   GO; GO:1903409; P:reactive oxygen species biosynthetic process; IMP:TAIR.
DR   GO; GO:0010468; P:regulation of gene expression; IMP:TAIR.
DR   InterPro; IPR017943; Bactericidal_perm-incr_a/b_dom.
DR   InterPro; IPR030675; BPI/LBP.
DR   InterPro; IPR045897; BPI/LBP_pln.
DR   InterPro; IPR001124; Lipid-bd_serum_glycop_C.
DR   InterPro; IPR017942; Lipid-bd_serum_glycop_N.
DR   PANTHER; PTHR46801; PTHR46801; 1.
DR   Pfam; PF01273; LBP_BPI_CETP; 1.
DR   Pfam; PF02886; LBP_BPI_CETP_C; 1.
DR   PIRSF; PIRSF002417; Lipid_binding_protein; 1.
DR   SMART; SM00328; BPI1; 1.
DR   SMART; SM00329; BPI2; 1.
DR   SUPFAM; SSF55394; SSF55394; 2.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Glycoprotein; Reference proteome; Signal.
FT   SIGNAL          1..24
FT                   /evidence="ECO:0000255"
FT   CHAIN           25..488
FT                   /note="Putative BPI/LBP family protein At1g04970"
FT                   /id="PRO_0000415535"
FT   CARBOHYD        79
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        109
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        231
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        242
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        341
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CONFLICT        217
FT                   /note="S -> N (in Ref. 4; AAM65272)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   488 AA;  53493 MW;  885BAD5DAF0A80C9 CRC64;
     MDVGRCFLFL LLPSFFFLPS QTQSTDSFTS VLVSQNGLDF VKNLLVNKAI ASIIPLQIPR
     IEKSMKIPFL GGIDVVVSNL TIYELDVASS YVKLGETGVV IVASGTTCNL SMNWHYSYST
     WLPPIEISDQ GIASVQVQGM EIGLSLGLKS DEGGLKLSLS ECGCHVEDIT IELEGGASWF
     YQGMVNAFKD QIGSSVESTI AKKLTEGVSD LDSFLQSLPK EIPVDDNADL NVTFTSDPIL
     RNSSITFEID GLFTKGETNQ VLKSFFKKSV SLVICPGNSK MLGISVDEAV FNSAAALYYN
     ADFVQWVVDK IPEQSLLNTA RWRFIIPQLY KKYPNQDMNL NISLSSPPLV KISEQYVGAN
     VNADLVINVL DANQVIPVAC ISLMIRGSGA LRVMGNNLGG SVSLEDFSMS LKWSNIGNLH
     LHLLQPIVWT VIQTVFVPYA NDHLEKGFPL PIMHGFTLQN AEIICSESEI TVCSDVAYLD
     SSQQPQWL
 
 
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