ID   Y1054_ORYSJ             Reviewed;         673 AA.
AC   Q5N6V0; A0A0P0VBT1;
DT   16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-2005, sequence version 1.
DT   03-AUG-2022, entry version 103.
DE   RecName: Full=B3 domain-containing protein Os01g0905400;
GN   OrderedLocusNames=Os01g0905400, LOC_Os01g67830;
GN   ORFNames=OsJ_04461, OSJNOa108M02.5;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA   Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA   Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA   Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA   Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA   Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA   Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA   Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA   Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA   Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA   Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR   EMBL; AP006839; BAD82806.1; -; Genomic_DNA.
DR   EMBL; AP008207; BAF07042.1; -; Genomic_DNA.
DR   EMBL; AP014957; BAS75787.1; -; Genomic_DNA.
DR   EMBL; CM000138; EAZ14539.1; -; Genomic_DNA.
DR   EMBL; AK063530; BAG88754.1; -; mRNA.
DR   RefSeq; XP_015645658.1; XM_015790172.1.
DR   AlphaFoldDB; Q5N6V0; -.
DR   SMR; Q5N6V0; -.
DR   STRING; 4530.OS01T0905400-01; -.
DR   PaxDb; Q5N6V0; -.
DR   PRIDE; Q5N6V0; -.
DR   EnsemblPlants; Os01t0905400-01; Os01t0905400-01; Os01g0905400.
DR   GeneID; 4325025; -.
DR   Gramene; Os01t0905400-01; Os01t0905400-01; Os01g0905400.
DR   KEGG; osa:4325025; -.
DR   eggNOG; ENOG502RXIH; Eukaryota.
DR   HOGENOM; CLU_459579_0_0_1; -.
DR   InParanoid; Q5N6V0; -.
DR   OMA; CEFELCS; -.
DR   OrthoDB; 438754at2759; -.
DR   Proteomes; UP000000763; Chromosome 1.
DR   Proteomes; UP000007752; Chromosome 1.
DR   Proteomes; UP000059680; Chromosome 1.
DR   Genevisible; Q5N6V0; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd10017; B3_DNA; 2.
DR   Gene3D; 2.40.330.10; -; 2.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   InterPro; IPR039218; REM_fam.
DR   PANTHER; PTHR31674; PTHR31674; 1.
DR   Pfam; PF02362; B3; 2.
DR   SMART; SM01019; B3; 2.
DR   SUPFAM; SSF101936; SSF101936; 2.
DR   PROSITE; PS50863; B3; 2.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..673
FT                   /note="B3 domain-containing protein Os01g0905400"
FT                   /id="PRO_0000378041"
FT   DNA_BIND        79..172
FT                   /note="TF-B3 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   DNA_BIND        576..671
FT                   /note="TF-B3 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          1..44
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          315..337
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..40
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   673 AA;  75403 MW;  618EFA268B16EA7F CRC64;
     MVELIKVPKI EQEEGNADSH GKEKADVVHE EKTEKVKRRR KRVSDPQRKK ACVDCTKRCI
     RIHGMASSSS EKARPTPTLP SFFKIMVGYF SENMDIPLPF ARTITDMTGS NVYLEDAYGL
     RWRVRLYLHD DVLSFGHGWK NFVLDHDISV GEFLVFRQIA RSVFTVQIFA ISACERIHLC
     ERNKRQSRKR KPGRKTGYPA NNQMVKVSSK DVVKRRKKQR TDEQIYDLDP RQHDMPVRVC
     IDSGSEQRCS ESSVKELDAA PDKSHAVVQV PATECNADPS YNAAGMKTIK NLEAIGASSS
     TKDVTWDANK SEDYPSFSYP ESSNVMTADK ESERSHQDRP MQLYCELGLE DGNAETENCE
     NSNVLENAEL RTPLAMMDLN EVGIDDIFLS ADIYEFDSDF CSPEAFSVDV NTEGLVSNGR
     TPGDCFGVPE TSRCLENKQM TDVPRTSTDD GSIAVHGIDI NALPSNTYPD IGQGNTYPDI
     DAAPDDCKKD KDVLHSECNK VAQKAHSSVK QDITKDGPRQ IAAEIMSSDP KTCELTYVRK
     NSVQPGISSV SQWNNSKGQE SGGTKSCVVL AVAANSKKFC ITIPPPDQTW LELPRRLPVL
     PRTKKQARKI LILKDPSMRL WPVLYQCTPK FNGFIAGWAD ISRENNLREG DTCEFELCSN
     SELSFQVLVP NLQ