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Y1060_ARATH
ID   Y1060_ARATH             Reviewed;         237 AA.
AC   Q9LM90; Q9LMW8;
DT   26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 97.
DE   RecName: Full=B3 domain-containing protein At1g20600;
GN   OrderedLocusNames=At1g20600; ORFNames=F2D10.9, F5M15.7;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA   Swaminathan K., Peterson K., Jack T.;
RT   "The plant B3 superfamily.";
RL   Trends Plant Sci. 13:647-655(2008).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAF79624.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC027665; AAF79624.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AC069251; AAF80610.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE29992.1; -; Genomic_DNA.
DR   RefSeq; NP_173484.1; NM_101911.2.
DR   AlphaFoldDB; Q9LM90; -.
DR   SMR; Q9LM90; -.
DR   STRING; 3702.AT1G20600.1; -.
DR   PaxDb; Q9LM90; -.
DR   PRIDE; Q9LM90; -.
DR   ProteomicsDB; 242413; -.
DR   EnsemblPlants; AT1G20600.1; AT1G20600.1; AT1G20600.
DR   GeneID; 838649; -.
DR   Gramene; AT1G20600.1; AT1G20600.1; AT1G20600.
DR   KEGG; ath:AT1G20600; -.
DR   Araport; AT1G20600; -.
DR   TAIR; locus:2030477; AT1G20600.
DR   eggNOG; ENOG502S91R; Eukaryota.
DR   HOGENOM; CLU_100761_0_0_1; -.
DR   InParanoid; Q9LM90; -.
DR   OMA; MHPLLEH; -.
DR   OrthoDB; 1443666at2759; -.
DR   PhylomeDB; Q9LM90; -.
DR   PRO; PR:Q9LM90; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9LM90; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd10017; B3_DNA; 1.
DR   Gene3D; 2.40.330.10; -; 1.
DR   InterPro; IPR005508; At2g31720-like.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   PANTHER; PTHR31541; PTHR31541; 1.
DR   SMART; SM01019; B3; 1.
DR   SUPFAM; SSF101936; SSF101936; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..237
FT                   /note="B3 domain-containing protein At1g20600"
FT                   /id="PRO_0000375122"
FT   DNA_BIND        126..230
FT                   /note="TF-B3"
FT   REGION          53..79
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        60..77
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   237 AA;  27283 MW;  347B58C803AEBCBF CRC64;
     MANSTGKPTS STQEDEEVTY ILAQLMQDVM DREEDIDDED DIDDEVASLP LLLVSQANQK
     QSRKREEKTE KNQPKRVKNQ NIMKINIHDF SEETLRLIED WYNAELDPQD IFGDDEVTRR
     FSRPIKKQLM SSDVDTDQSR LMLSKEQVKE KMLPFLEESE DPVKGVDVSV YGPDGEVQQM
     KFKMWNGDKT PVLTSGWMQF VADYGLLKTS DFVTDGKVSQ LEHVFIRGSK VRCCNTS
 
 
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