Y1164_METJA
ID Y1164_METJA Reviewed; 318 AA.
AC Q58564;
DT 25-OCT-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=Putative HTH-type transcriptional regulatory protein MJ1164 {ECO:0000255|HAMAP-Rule:MF_00584};
GN OrderedLocusNames=MJ1164;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
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DR EMBL; L77117; AAB99166.1; -; Genomic_DNA.
DR PIR; C64445; C64445.
DR AlphaFoldDB; Q58564; -.
DR SMR; Q58564; -.
DR STRING; 243232.MJ_1164; -.
DR EnsemblBacteria; AAB99166; AAB99166; MJ_1164.
DR KEGG; mja:MJ_1164; -.
DR eggNOG; arCOG04152; Archaea.
DR HOGENOM; CLU_075726_0_0_2; -.
DR InParanoid; Q58564; -.
DR OMA; PGVVYFR; -.
DR PhylomeDB; Q58564; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; -; 1.
DR HAMAP; MF_00584; HTH_type_cro_C1; 1.
DR InterPro; IPR020886; Arc_TR_HTH.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; SSF47413; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..318
FT /note="Putative HTH-type transcriptional regulatory protein
FT MJ1164"
FT /id="PRO_0000144856"
FT DOMAIN 131..189
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
FT DNA_BIND 142..161
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
SQ SEQUENCE 318 AA; 36530 MW; F7E61B67F09263CD CRC64;
MMIMREILIS ECIELLRSHK FIVSKPLGRS CFDMVASKED IRLILKILKN IDSLSRDQSK
ELKKISKILH GTPLIIGIRT RNAPMEHGVV YDRYNIKAVT FETFRDYLEG SPPMVYANRG
GFFVKIDGKV LKEVREAMGI SVGKLAEVAG VSRKAIYKYE TQMANPSVDV ALKIEEFLDV
PLVKGIDLFE PVDDEDVENK LENLEDFKKE AINFLNELGF KSFVVEKAPF DAVAEKDMDN
NLNILLTNIE EKDNEEVKRK ALFVRELSRL LDGYSLLILE EKEKEYKNLP VVSIEELKKM
DDALELIEHI KSMLRDIR