ID   CAPS1_MIMIV             Reviewed;         593 AA.
AC   Q5UQL7;
DT   13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT   09-JAN-2007, sequence version 2.
DT   23-FEB-2022, entry version 56.
DE   RecName: Full=Capsid protein 1;
DE   AltName: Full=Capsid protein D13L;
GN   OrderedLocusNames=MIMI_L425;
OS   Acanthamoeba polyphaga mimivirus (APMV).
OC   Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC   Imitervirales; Mimiviridae; Mimivirus.
OX   NCBI_TaxID=212035;
OH   NCBI_TaxID=5757; Acanthamoeba polyphaga (Amoeba).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Rowbotham-Bradford;
RX   PubMed=15486256; DOI=10.1126/science.1101485;
RA   Raoult D., Audic S., Robert C., Abergel C., Renesto P., Ogata H.,
RA   La Scola B., Susan M., Claverie J.-M.;
RT   "The 1.2-megabase genome sequence of Mimivirus.";
RL   Science 306:1344-1350(2004).
RN   [2]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], AND SUBCELLULAR
RP   LOCATION.
RC   STRAIN=Rowbotham-Bradford;
RX   PubMed=16971431; DOI=10.1128/jvi.00940-06;
RA   Renesto P., Abergel C., Decloquement P., Moinier D., Azza S., Ogata H.,
RA   Fourquet P., Gorvel J.-P., Claverie J.-M., Raoult D.;
RT   "Mimivirus giant particles incorporate a large fraction of anonymous and
RT   unique gene products.";
RL   J. Virol. 80:11678-11685(2006).
RN   [3]
RP   REVISION OF GENE MODEL, AND IDENTIFICATION BY MASS SPECTROMETRY.
RC   STRAIN=Rowbotham-Bradford;
RA   Suhre K., Abergel C., Ogata H., Claverie J.-M.;
RL   Submitted (DEC-2006) to UniProtKB.
RN   [4]
RP   CHARACTERIZATION.
RC   STRAIN=Rowbotham-Bradford;
RX   PubMed=19432951; DOI=10.1186/1471-2199-10-39;
RA   Azza S., Cambillau C., Raoult D., Suzan-Monti M.;
RT   "Revised Mimivirus major capsid protein sequence reveals intron-containing
RT   gene structure and extra domain.";
RL   BMC Mol. Biol. 10:39-39(2009).
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:16971431}.
CC   -!- SIMILARITY: Belongs to the NCLDV major capsid protein family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAV50694.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AY653733; AAV50694.1; ALT_SEQ; Genomic_DNA.
DR   RefSeq; YP_003986929.1; NC_014649.1.
DR   SMR; Q5UQL7; -.
DR   GeneID; 9925046; -.
DR   KEGG; vg:9925046; -.
DR   Proteomes; UP000001134; Genome.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.70.9.20; -; 2.
DR   InterPro; IPR031654; Capsid_N.
DR   InterPro; IPR007542; MCP_C.
DR   InterPro; IPR038519; MCP_C_sf.
DR   InterPro; IPR016112; VP_dsDNA_II.
DR   Pfam; PF16903; Capsid_N; 1.
DR   Pfam; PF04451; Capsid_NCLDV; 1.
DR   SUPFAM; SSF49749; SSF49749; 3.
PE   1: Evidence at protein level;
KW   Capsid protein; Reference proteome; Virion.
FT   CHAIN           1..593
FT                   /note="Capsid protein 1"
FT                   /id="PRO_0000071168"
SQ   SEQUENCE   593 AA;  67260 MW;  4233F50BD08DE749 CRC64;
     MAGGLLQLVA YGAQDVYLTG NPMITFFKVV YRRHTNFAVE SIEQFFGGNL GFGKKSSAEI
     NRSGDLITQV FLKVTLPEVR YCGDFTNFGH VEFAWVRNIG HAIVEETELE IGGSPIDKHY
     GDWLQIWQDV SSSKDHEKGL AKMLGDVPEL TSISTLSWDV PDNTVLKPSY TLYVPLQFYF
     NRNNGLALPL IALQYHQVRI YVKFRQADQC YIASDAFKSG CGNLQLDDVS LYVNYVFLDT
     EERRRFAQVS HEYLIEQLQF TGEESAGSSN SAKYKLNFNH PVKAIYWVTK LGNYQGGKFM
     TYDPVCWENA RENAAKLLLL AQYDLDDWGY FQEPGGYECE GNDGRSYVGD CGVQYTAVDP
     SNPSEEPSYI FNDTTTAEAF DGSLLIGKLA PCVPLLKRNK DVDLKDKVEG IIRIHTDFEN
     DRMKYPEVEK ITRNDLTLHD LSVPISKYDV DNRVDYIKKF DVTVWQHNNF GLLIDGSGNP
     THEAELQLNG QPRQSKRGGI WYDTVNPTVH HTKSPRDGVN VFSFALNPEE HQPSCTCNFS
     RIDTAQLNLW FQHFTNHKFA DVFADNDNKV LIFAVNYNVL RMLSGMAGLA YSN