CAPS1_SIFVH
ID CAPS1_SIFVH Reviewed; 204 AA.
AC Q914J4;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 23-FEB-2022, entry version 37.
DE RecName: Full=Major capsid protein 1;
DE AltName: Full=MCP1;
GN Name=SIFV0036;
OS Sulfolobus islandicus filamentous virus (isolate Iceland/Hveragerdi)
OS (SIFV).
OC Viruses; Adnaviria; Zilligvirae; Taleaviricota; Tokiviricetes;
OC Ligamenvirales; Lipothrixviridae; Betalipothrixvirus.
OX NCBI_TaxID=654908;
OH NCBI_TaxID=43080; Sulfolobus islandicus.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=10662621; DOI=10.1006/viro.1999.0105;
RA Arnold H.P., Zillig W., Ziese U., Holz I., Crosby M., Utterback T.,
RA Weidmann J.F., Umayam L.A., Teffera K., Kristjanson J.K., Klenk H.P.,
RA Nelson K.E., Fraser C.M.;
RT "A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon
RT Sulfolobus.";
RL Virology 267:252-266(2000).
RN [2] {ECO:0007744|PDB:6WQ2}
RP STRUCTURE BY ELECTRON MICROSCOPY (4.00 ANGSTROMS), SUBUNIT, DOMAIN,
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=32759221; DOI=10.1073/pnas.2011125117;
RA Wang F., Baquero D.P., Beltran L.C., Su Z., Osinski T., Zheng W.,
RA Prangishvili D., Krupovic M., Egelman E.H.;
RT "Structures of filamentous viruses infecting hyperthermophilic archaea
RT explain DNA stabilization in extreme environments.";
RL Proc. Natl. Acad. Sci. U.S.A. 117:19643-19652(2020).
CC -!- FUNCTION: Self-assembles to form a helical, filamentous nucleocapsid
CC mesuring 1980 nm in length and 24 nm in width. Together with capsid
CC protein 2, wraps arounds the DNA and maintains it in an A-form. Capsid
CC proteins probably maintain the DNA in A-form by non-specific
CC desolvation and specific coordination of the DNA phosphate groups by
CC positively charged residues. This certainly protects the viral DNA
CC under conditions such as the extreme desiccation of its host.
CC {ECO:0000269|PubMed:32759221}.
CC -!- SUBUNIT: Heterodimer composed of major capsid protein 1 and major
CC capsid protein 2. {ECO:0000269|PubMed:32759221}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:32759221}.
CC -!- DOMAIN: The N-terminus projects into a DNA groove.
CC {ECO:0000269|PubMed:32759221}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AF440571; AAL27747.1; -; Genomic_DNA.
DR RefSeq; NP_445701.1; NC_003214.2.
DR PDB; 6WQ2; EM; 4.00 A; a/b/c/d/e/f/g/h/i/j/k/l/m/n/p/r/t=1-204.
DR PDBsum; 6WQ2; -.
DR SMR; Q914J4; -.
DR GeneID; 922344; -.
DR KEGG; vg:922344; -.
DR Proteomes; UP000007017; Genome.
DR GO; GO:0019029; C:helical viral capsid; IDA:UniProtKB.
DR GO; GO:0003677; F:DNA binding; IDA:UniProtKB.
PE 1: Evidence at protein level;
KW 3D-structure; DNA-binding; Reference proteome; Virion.
FT CHAIN 1..204
FT /note="Major capsid protein 1"
FT /id="PRO_0000385414"
SQ SEQUENCE 204 AA; 22533 MW; A8426970EF602A2C CRC64;
MAGRQSHKKI DVRNDTSTRY KGKLYGIFVN YMGEKYAQQL VENMYSNYND VFVEIYNKMH
NALRPTLVKL AGAGATFPLW QLVNEAIYAV YLTHKETASF LVTKYVARGV PAMTVKTLLA
EVGNQLKELV PAVAEQIGSV TLDHTNVVST VDNIVTSMPA LPNSYAGVLM KTKVPTVTPH
YAGTGTFSSM ESAYKALEDI ERGL