Y1181_ARATH
ID Y1181_ARATH Reviewed; 692 AA.
AC Q94BU1; Q8RXG7; Q9M9G5;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic;
DE EC=2.7.-.-;
DE Flags: Precursor;
GN OrderedLocusNames=At1g71810; ORFNames=F14O23.19, F14O23_17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=16461379; DOI=10.1104/pp.105.076083;
RA Ytterberg A.J., Peltier J.-B., van Wijk K.J.;
RT "Protein profiling of plastoglobules in chloroplasts and chromoplasts. A
RT surprising site for differential accumulation of metabolic enzymes.";
RL Plant Physiol. 140:984-997(2006).
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=22274653; DOI=10.1104/pp.111.193144;
RA Lundquist P.K., Poliakov A., Bhuiyan N.H., Zybailov B., Sun Q.,
RA van Wijk K.J.;
RT "The functional network of the Arabidopsis plastoglobule proteome based on
RT quantitative proteomics and genome-wide coexpression analysis.";
RL Plant Physiol. 158:1172-1192(2012).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast, plastoglobule
CC {ECO:0000269|PubMed:16461379, ECO:0000269|PubMed:22274653}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q94BU1-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q94BU1-2; Sequence=VSP_025068, VSP_025069, VSP_025070,
CC VSP_025071;
CC -!- SIMILARITY: Belongs to the protein kinase superfamily. ADCK protein
CC kinase family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF43234.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC012654; AAF43234.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE35235.1; -; Genomic_DNA.
DR EMBL; AY039896; AAK64000.1; -; mRNA.
DR EMBL; AY094006; AAM16267.1; -; mRNA.
DR EMBL; AY081264; AAL91153.1; -; mRNA.
DR PIR; F96740; F96740.
DR RefSeq; NP_565025.1; NM_105839.3. [Q94BU1-1]
DR AlphaFoldDB; Q94BU1; -.
DR SMR; Q94BU1; -.
DR STRING; 3702.AT1G71810.1; -.
DR PaxDb; Q94BU1; -.
DR PRIDE; Q94BU1; -.
DR ProteomicsDB; 242461; -. [Q94BU1-1]
DR EnsemblPlants; AT1G71810.1; AT1G71810.1; AT1G71810. [Q94BU1-1]
DR GeneID; 843511; -.
DR Gramene; AT1G71810.1; AT1G71810.1; AT1G71810. [Q94BU1-1]
DR KEGG; ath:AT1G71810; -.
DR Araport; AT1G71810; -.
DR TAIR; locus:2013041; AT1G71810.
DR eggNOG; KOG1235; Eukaryota.
DR HOGENOM; CLU_006533_4_3_1; -.
DR InParanoid; Q94BU1; -.
DR OMA; AFNMIED; -.
DR OrthoDB; 1299789at2759; -.
DR PhylomeDB; Q94BU1; -.
DR PRO; PR:Q94BU1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q94BU1; baseline and differential.
DR Genevisible; Q94BU1; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0010287; C:plastoglobule; HDA:TAIR.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004672; F:protein kinase activity; IBA:GO_Central.
DR GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR InterPro; IPR004147; ABC1_dom.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR000719; Prot_kinase_dom.
DR Pfam; PF03109; ABC1; 1.
DR SUPFAM; SSF56112; SSF56112; 1.
DR PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; ATP-binding; Chloroplast; Kinase; Nucleotide-binding;
KW Plastid; Reference proteome; Transferase; Transit peptide.
FT TRANSIT 1..39
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 40..692
FT /note="Uncharacterized aarF domain-containing protein
FT kinase At1g71810, chloroplastic"
FT /id="PRO_0000286523"
FT DOMAIN 189..523
FT /note="Protein kinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT ACT_SITE 343
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT BINDING 195..203
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT BINDING 218
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT VAR_SEQ 1..263
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_025068"
FT VAR_SEQ 264..265
FT /note="FK -> MQ (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_025069"
FT VAR_SEQ 506..520
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_025070"
FT VAR_SEQ 618
FT /note="S -> SVST (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14593172"
FT /id="VSP_025071"
SQ SEQUENCE 692 AA; 77462 MW; EFF795E8DF5A81BF CRC64;
MLRLPSSMPI VSFPANPNLL INPQPSWPSR RGNSAVVVSA ASRDVDSFTS KSGYLFSLSA
DEADSLSEYN FPRIDGMYKK KPLILLRRLA QIGTTFSYWF GLRLADEALE RSDQMFKVRA
AELRKLLVEL GPAYVKIAQA VSSRPDLIPP IYLDELSLLQ DQITPFSTEV AFNMIEDELG
LPIDELFSEI SPEPVAAASL GQVYQARLRR SGKVVAVKVQ RPGVRAAIAL DTLILRYIAG
LIKKAGRFNS DLEAVVDEWA TSLFKEMDYL NEAQNGIKFR KLYGGIKDVL VPKMYTEYST
SKVLVMEWVE GQKLNEVNDL YLVEVGVYCS FNQLLEYGFY HADPHPGNFL RTYDGQLAYL
DFGMMGDFRP ELRDGFMEAC LHLVNRDFKA LAKDFVTLGL LPPTAEKSAV TKALTDVFQD
AISRGVRNIS FGDLLGDLGK TMYRFKFRIP PYFSLVIRSL AVLEGIAIGI SPNYKVLGST
YPWIARKILT DSSPQLKSSL QNLLYEEGVF RIDRLESLLS ESLRTETALV QKPVVGTESN
IAMKQMLAFT FTEQGSFVRE ILLREFAKGL DAYGLATLDS FTFSGSGPSS SLTEEDMTNL
RTFYRLISLF SGMQKAKSQV KAVSKYGEAL TPLDEASLVM YQLPSAQEML PILSILPELP
QESQQRLLQL PGDLVGRLVT RAFARTIRRI FL
