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Y1181_ARATH
ID   Y1181_ARATH             Reviewed;         692 AA.
AC   Q94BU1; Q8RXG7; Q9M9G5;
DT   15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-DEC-2001, sequence version 1.
DT   03-AUG-2022, entry version 123.
DE   RecName: Full=Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic;
DE            EC=2.7.-.-;
DE   Flags: Precursor;
GN   OrderedLocusNames=At1g71810; ORFNames=F14O23.19, F14O23_17;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP   ANALYSIS].
RC   STRAIN=cv. Columbia;
RX   PubMed=16461379; DOI=10.1104/pp.105.076083;
RA   Ytterberg A.J., Peltier J.-B., van Wijk K.J.;
RT   "Protein profiling of plastoglobules in chloroplasts and chromoplasts. A
RT   surprising site for differential accumulation of metabolic enzymes.";
RL   Plant Physiol. 140:984-997(2006).
RN   [5]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP   ANALYSIS].
RC   STRAIN=cv. Columbia;
RX   PubMed=22274653; DOI=10.1104/pp.111.193144;
RA   Lundquist P.K., Poliakov A., Bhuiyan N.H., Zybailov B., Sun Q.,
RA   van Wijk K.J.;
RT   "The functional network of the Arabidopsis plastoglobule proteome based on
RT   quantitative proteomics and genome-wide coexpression analysis.";
RL   Plant Physiol. 158:1172-1192(2012).
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast, plastoglobule
CC       {ECO:0000269|PubMed:16461379, ECO:0000269|PubMed:22274653}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q94BU1-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q94BU1-2; Sequence=VSP_025068, VSP_025069, VSP_025070,
CC                                  VSP_025071;
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. ADCK protein
CC       kinase family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAF43234.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC012654; AAF43234.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002684; AEE35235.1; -; Genomic_DNA.
DR   EMBL; AY039896; AAK64000.1; -; mRNA.
DR   EMBL; AY094006; AAM16267.1; -; mRNA.
DR   EMBL; AY081264; AAL91153.1; -; mRNA.
DR   PIR; F96740; F96740.
DR   RefSeq; NP_565025.1; NM_105839.3. [Q94BU1-1]
DR   AlphaFoldDB; Q94BU1; -.
DR   SMR; Q94BU1; -.
DR   STRING; 3702.AT1G71810.1; -.
DR   PaxDb; Q94BU1; -.
DR   PRIDE; Q94BU1; -.
DR   ProteomicsDB; 242461; -. [Q94BU1-1]
DR   EnsemblPlants; AT1G71810.1; AT1G71810.1; AT1G71810. [Q94BU1-1]
DR   GeneID; 843511; -.
DR   Gramene; AT1G71810.1; AT1G71810.1; AT1G71810. [Q94BU1-1]
DR   KEGG; ath:AT1G71810; -.
DR   Araport; AT1G71810; -.
DR   TAIR; locus:2013041; AT1G71810.
DR   eggNOG; KOG1235; Eukaryota.
DR   HOGENOM; CLU_006533_4_3_1; -.
DR   InParanoid; Q94BU1; -.
DR   OMA; AFNMIED; -.
DR   OrthoDB; 1299789at2759; -.
DR   PhylomeDB; Q94BU1; -.
DR   PRO; PR:Q94BU1; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q94BU1; baseline and differential.
DR   Genevisible; Q94BU1; AT.
DR   GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR   GO; GO:0010287; C:plastoglobule; HDA:TAIR.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004672; F:protein kinase activity; IBA:GO_Central.
DR   GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR   InterPro; IPR004147; ABC1_dom.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   Pfam; PF03109; ABC1; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; ATP-binding; Chloroplast; Kinase; Nucleotide-binding;
KW   Plastid; Reference proteome; Transferase; Transit peptide.
FT   TRANSIT         1..39
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           40..692
FT                   /note="Uncharacterized aarF domain-containing protein
FT                   kinase At1g71810, chloroplastic"
FT                   /id="PRO_0000286523"
FT   DOMAIN          189..523
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   ACT_SITE        343
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         195..203
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         218
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   VAR_SEQ         1..263
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:14593172"
FT                   /id="VSP_025068"
FT   VAR_SEQ         264..265
FT                   /note="FK -> MQ (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:14593172"
FT                   /id="VSP_025069"
FT   VAR_SEQ         506..520
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:14593172"
FT                   /id="VSP_025070"
FT   VAR_SEQ         618
FT                   /note="S -> SVST (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:14593172"
FT                   /id="VSP_025071"
SQ   SEQUENCE   692 AA;  77462 MW;  EFF795E8DF5A81BF CRC64;
     MLRLPSSMPI VSFPANPNLL INPQPSWPSR RGNSAVVVSA ASRDVDSFTS KSGYLFSLSA
     DEADSLSEYN FPRIDGMYKK KPLILLRRLA QIGTTFSYWF GLRLADEALE RSDQMFKVRA
     AELRKLLVEL GPAYVKIAQA VSSRPDLIPP IYLDELSLLQ DQITPFSTEV AFNMIEDELG
     LPIDELFSEI SPEPVAAASL GQVYQARLRR SGKVVAVKVQ RPGVRAAIAL DTLILRYIAG
     LIKKAGRFNS DLEAVVDEWA TSLFKEMDYL NEAQNGIKFR KLYGGIKDVL VPKMYTEYST
     SKVLVMEWVE GQKLNEVNDL YLVEVGVYCS FNQLLEYGFY HADPHPGNFL RTYDGQLAYL
     DFGMMGDFRP ELRDGFMEAC LHLVNRDFKA LAKDFVTLGL LPPTAEKSAV TKALTDVFQD
     AISRGVRNIS FGDLLGDLGK TMYRFKFRIP PYFSLVIRSL AVLEGIAIGI SPNYKVLGST
     YPWIARKILT DSSPQLKSSL QNLLYEEGVF RIDRLESLLS ESLRTETALV QKPVVGTESN
     IAMKQMLAFT FTEQGSFVRE ILLREFAKGL DAYGLATLDS FTFSGSGPSS SLTEEDMTNL
     RTFYRLISLF SGMQKAKSQV KAVSKYGEAL TPLDEASLVM YQLPSAQEML PILSILPELP
     QESQQRLLQL PGDLVGRLVT RAFARTIRRI FL
 
 
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