Y1196_ARATH
ID Y1196_ARATH Reviewed; 287 AA.
AC Q9LMC2;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=UPF0725 protein At1g19060;
GN OrderedLocusNames=At1g19060; ORFNames=F14D16.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
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DR EMBL; AC068602; AAF79299.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29796.1; -; Genomic_DNA.
DR PIR; B86324; B86324.
DR RefSeq; NP_173340.1; NM_101764.1.
DR AlphaFoldDB; Q9LMC2; -.
DR SMR; Q9LMC2; -.
DR PaxDb; Q9LMC2; -.
DR PRIDE; Q9LMC2; -.
DR ProteomicsDB; 242463; -.
DR EnsemblPlants; AT1G19060.1; AT1G19060.1; AT1G19060.
DR GeneID; 838488; -.
DR Gramene; AT1G19060.1; AT1G19060.1; AT1G19060.
DR KEGG; ath:AT1G19060; -.
DR Araport; AT1G19060; -.
DR TAIR; locus:2011301; AT1G19060.
DR HOGENOM; CLU_053767_0_1_1; -.
DR OMA; WINLYLE; -.
DR OrthoDB; 1713483at2759; -.
DR PhylomeDB; Q9LMC2; -.
DR PRO; PR:Q9LMC2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LMC2; baseline and differential.
DR Genevisible; Q9LMC2; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 2.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..287
FT /note="UPF0725 protein At1g19060"
FT /id="PRO_0000363137"
SQ SEQUENCE 287 AA; 32727 MW; EB0D3F9A7619448B CRC64;
MDWTMISGSR DESLHAARDY WRRLNESECF DIEGIEAPPG AIALIPYDCQ LPNSFHPLPL
WVKLYASAGL HRFNMLEVLV NERSVGKLNI IVPIARPKGV TTNERFIPCD CFSVDDKLPQ
WPSHDSFNDR KRFYSVKESE LQNNDWINLY LELVLCAIQK VRISDSDLSK LKIVKAVIET
KEDMVPPNER LNAKTAVVYI TFKGLANARI AAGEHYERKA IIRRIFNEHT GHLSLLGDLI
GEKKFVNIDP VTYFNSPAYL EDITHELPPE SPWMDILAGT GSMDQID