Y1214_ORYSJ
ID Y1214_ORYSJ Reviewed; 661 AA.
AC Q2QMT7;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=B3 domain-containing protein Os12g0591400;
GN OrderedLocusNames=Os12g0591300, LOC_Os12g40070;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; DP000011; ABA99154.1; -; Genomic_DNA.
DR EMBL; AP008218; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014968; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; Q2QMT7; -.
DR SMR; Q2QMT7; -.
DR PaxDb; Q2QMT7; -.
DR PRIDE; Q2QMT7; -.
DR eggNOG; ENOG502S27N; Eukaryota.
DR InParanoid; Q2QMT7; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 4.
DR Gene3D; 2.40.330.10; -; 4.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR044837; REM16-like.
DR PANTHER; PTHR31391; PTHR31391; 4.
DR Pfam; PF02362; B3; 4.
DR SMART; SM01019; B3; 4.
DR SUPFAM; SSF101936; SSF101936; 4.
DR PROSITE; PS50863; B3; 4.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..661
FT /note="B3 domain-containing protein Os12g0591400"
FT /id="PRO_0000376993"
FT DNA_BIND 2..95
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 197..290
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 437..535
FT /note="TF-B3 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 562..658
FT /note="TF-B3 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
SQ SEQUENCE 661 AA; 75285 MW; 821D3FC2E3B3F6C6 CRC64;
MGDQKRSFIN VMIGDFVAVP TKFANFIRGQ ISEVVKLEVP NGKTYDVQVA KEHNELVLRS
GWGAFARDYE LKQCDILVFA YSGSSRFKVR IFNPSGCEKE LSCVMMNNTP CGHEGSMSYH
DNHLQSPSES SSFFNISLPP HSPFQELSGV DSTSLLVSDP PNMQQFCLRC SWTNPKRLAK
PSLAIASLSH QHLAFDKTRC MFILKIENDT LKTILKMFAK NVQGLISGVA KLEVPDGKTY
DVEISKEHNE LVFRSGWEVF AIAYELEQGD ILAFGYSGNS HFKVQIFNPS NCEKELSCVV
MNRSISDDNH RQSPRRERMN KPSTTCMDCI TNHYWLHMDD RERYFFKVMM SVSDIKDELA
IPKKFAANVR GKIPEQVRLE VSDDVPSSED IKDPMSSGGL QKSKKSCYVL PMLYNMTSAQ
ESEVLALEKK IQPQIPLYIT AMDKTSVASG SLVFCKDYAV RYLLDQNRTI KLCQSGGSKT
WDISLDMDTD DLYALSTGWL DFFRCNLLQE GDICVFEASK SKRGVALTFH PFKESHCPKS
SEYTLSTKSP TRRVPKRDYF ATNLTNLTDQ QERKCFSVKY ASKYLPHKDQ NMRLRLPETK
YKCKAALHID TSTNLHKLLK GWGKFVNDNK LEIHDICLFQ LMKNKKKLTM TVHIIRKGEC
S