CAPSD_AQRVC
ID CAPSD_AQRVC Reviewed; 1214 AA.
AC Q8JU60;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 23-FEB-2022, entry version 76.
DE RecName: Full=Major inner capsid protein VP3;
DE EC=3.6.4.13;
DE AltName: Full=ATP-dependent DNA helicase VP3;
GN Name=S3;
OS Aquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Spinareovirinae; Aquareovirus.
OX NCBI_TaxID=185783;
OH NCBI_TaxID=28800; Notemigonus crysoleucas (Golden shiner) (Cyprinus crysoleucas).
OH NCBI_TaxID=90988; Pimephales promelas (Fathead minnow).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=12124458; DOI=10.1099/0022-1317-83-8-1941;
RA Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P.,
RA de Micco P., de Lamballerie X.;
RT "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT Reoviridae).";
RL J. Gen. Virol. 83:1941-1951(2002).
CC -!- FUNCTION: Self-assembles to form an icosahedral capsid with a pseudo
CC T=2 symmetry, about 60 nm in diameter, and consisting of 120 VP3
CC subunits. Displays NTPase, RNA 5'-triphosphatase (RTPase) and RNA
CC helicase activities and probably participates in transcription of the
CC viral genome. Helicase activity might be involved in unwinding or
CC reannealing dsRNA during RNA synthesis. RTPase enzymatic activity
CC represents the first step in RNA capping, which yields a 5'-
CC diphosphorylated plus-strand RNA (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- SUBUNIT: Interacts with VP6. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the reoviridae major inner capsid protein
CC family. {ECO:0000305}.
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DR EMBL; AF403400; AAM92746.1; -; Genomic_RNA.
DR RefSeq; NP_938062.1; NC_005168.1.
DR SMR; Q8JU60; -.
DR GeneID; 2648331; -.
DR KEGG; vg:2648331; -.
DR Proteomes; UP000006713; Genome.
DR GO; GO:0039616; C:T=2 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0039625; C:viral inner capsid; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0006370; P:7-methylguanosine mRNA capping; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1830.10; -; 1.
DR InterPro; IPR044949; Lambda-1/VP3.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Capsid protein; Helicase; Hydrolase; Inner capsid protein;
KW Metal-binding; mRNA capping; mRNA processing; Nucleotide-binding;
KW Reference proteome; T=2 icosahedral capsid protein; Virion; Zinc;
KW Zinc-finger.
FT CHAIN 1..1214
FT /note="Major inner capsid protein VP3"
FT /id="PRO_0000404169"
FT ZN_FING 117..140
FT /note="C2H2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 1..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1214 AA; 132053 MW; CAE57A8B548185DB CRC64;
MPRRSARKAQ SATASPADTN VVPAKDAPTT NSPPSTTSPN QAAADANQQQ AGIVSSQSGP
NAVGDSAPST SVNNDGDIIT RPTSDSIAAV ANATKPAAVV SDPQSMKVTP IVNPSSYVCN
VCNARFSTMS ALSEHLRSDH RDDASTLLAT PMINNAIRSF LTAWDGIRIL SPDVSSKHLS
AYLDSAVANG PELIVEDTGL CTSFMLLDNI PSAHLTKELI GFTWFMQMYQ MTPPLPEGAV
NRIVCMTNWA SLGDEGRGLE VRLPPPTDSS VHAYKTVLSR GYIDNAQFNP LALRSNVLLM
LLQFTLSNLK INKSSTFTSD VTTITSGRMI RAFEGRPELL ALAYPGRAVL PTQTKNAQFL
STAIADRIGR LDRANLIGGE VSAMVECMEL CDALTLHIRE TYVMLLRSMH QDPTQIVQIV
NECANNLLNS TIPISLRPTI LCPWFASSED LRLQQVMHLV NISSNTAAAL PLVEALSTLL
RSVTPLVLDP TVLTNAITTI SESTTQTISP ISEILRLLQP MGNDYAAFWK CIASWAYNGL
VTTVLSEDAF PDSSQSITHL PSMWKCLFLT LAGPMTSDPH SPVKVFMALA NLLAQPEPIA
IGVPGMHQTT PASQFSHPGV WPPGFLNPQL INPQQAPLLR AFAEHIRANW PQPSEFGYGS
TLQGSANLFI PPNRMVYPWP NQPLPRLTVA PTYDSAMSNW ISTTIAFFIR VVNSVNMTAT
VNDLTRRTMT GVMTAMRQVK TMTPFYIQHM CPTELSVLAS VTVTPPFQVP FTRLVQNDVI
TNVLVARVDP AQRGDAAVDI RATHATFAAA LPVDPAAIVV AMLCGQTETN LIPSHHYGKA
FAPLFASNAM FTRNQRAVIT REAFVCARSA VAQCQDAGFL VPRPLDALRQ FDVTSAAAAE
IMHAVNDAFK TAFDLDGALL DGLALYGDPR IADLSAAYLQ YGGNVVREHV PPGPSHIHRT
LQQVESTFMA EMNLFNVARG NLYLVQTATN GNWSPMAPVA APPFVRGGPN VRVVGRFGTI
VPRPDGLEPQ LIDDGNVPRD IAGDWVYPSD VLQVSVAVFC DYVWPMVKAG RTRVLVELGH
YVYTLHYYDP QISLDEAPIL EEWLSKINPA GIPPVPFCIP IPQVYPCITA RRVHYAFTSE
NNNDSLFSTN AASIDTAFGE NAAVSPLRWP GLVDPNYRVG TNDLPNRITL YNSLYRYNFT
YPTLDGIMYV RSAT