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Y1235_ORYSJ
ID   Y1235_ORYSJ             Reviewed;         402 AA.
AC   Q8S2E6; C7IXR6;
DT   16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2002, sequence version 1.
DT   03-AUG-2022, entry version 94.
DE   RecName: Full=B3 domain-containing protein Os01g0723500;
GN   OrderedLocusNames=Os01g0723500, LOC_Os01g52514; ORFNames=P0022F10.16;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA   Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA   Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA   Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA   Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA   Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA   Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA   Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA   Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA   Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA   Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR   EMBL; AP003229; BAB89497.1; -; Genomic_DNA.
DR   EMBL; AP008207; BAH91276.1; -; Genomic_DNA.
DR   EMBL; AP014957; BAS74110.1; -; Genomic_DNA.
DR   RefSeq; XP_015614236.1; XM_015758750.1.
DR   AlphaFoldDB; Q8S2E6; -.
DR   SMR; Q8S2E6; -.
DR   PaxDb; Q8S2E6; -.
DR   PRIDE; Q8S2E6; -.
DR   EnsemblPlants; Os01t0723500-00; Os01t0723500-00; Os01g0723500.
DR   GeneID; 9268171; -.
DR   Gramene; Os01t0723500-00; Os01t0723500-00; Os01g0723500.
DR   KEGG; osa:9268171; -.
DR   eggNOG; ENOG502RZR8; Eukaryota.
DR   HOGENOM; CLU_015069_1_1_1; -.
DR   InParanoid; Q8S2E6; -.
DR   OMA; EMMRMIP; -.
DR   OrthoDB; 1210487at2759; -.
DR   Proteomes; UP000000763; Chromosome 1.
DR   Proteomes; UP000059680; Chromosome 1.
DR   Genevisible; Q8S2E6; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd10017; B3_DNA; 2.
DR   Gene3D; 2.40.330.10; -; 2.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   InterPro; IPR044837; REM16-like.
DR   PANTHER; PTHR31391; PTHR31391; 1.
DR   Pfam; PF02362; B3; 2.
DR   SMART; SM01019; B3; 2.
DR   SUPFAM; SSF101936; SSF101936; 2.
DR   PROSITE; PS50863; B3; 2.
PE   3: Inferred from homology;
KW   DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..402
FT                   /note="B3 domain-containing protein Os01g0723500"
FT                   /id="PRO_0000378042"
FT   DNA_BIND        18..121
FT                   /note="TF-B3 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   DNA_BIND        289..381
FT                   /note="TF-B3 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          126..203
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        146..164
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        172..191
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   402 AA;  44783 MW;  CFCA1F234BC35F76 CRC64;
     MPGAGGKKKS PWASGERRPH FFKVLVGDFK QRLKIPPNFC KHIPWEESRK AKGLKEASMA
     ATLEGPSGRT WLVVIRRTAE GTFFTSGWPK FVQDQALREL EFVVFRYDGN TRFTAMVFDR
     TACEREDLMG GGGGDRPRKK RGRPRTAAAS RDAARPKKDS VGKEMVTYRA SPSGGQPLQI
     VDSSWTPEPG STAVKNEEDA DELPVCELPA SSASPPRHVP EGALDADGGA ARRGAAKTRS
     LQDDLALASI PPSIRRYKGY VSRRRAVATA ERQRATEIAH AFRSPLPYCV IRMSTMHVYY
     SFMMRFPTGF SRQHLPRERT DVVLRDPGGK VWSVLYIPNT RDRLSRGWCA FARGNCLEEG
     DYCVFELVAA AEFRVHIFRV VEPAVPAVRL RRVTVTCGRG PT
 
 
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