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CAPSD_BOTVX
ID   CAPSD_BOTVX             Reviewed;         400 AA.
AC   Q6YNQ5;
DT   02-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   23-FEB-2022, entry version 41.
DE   RecName: Full=Capsid protein;
DE            Short=CP;
GN   Name=ORF3;
OS   Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
OS   (BOTV-X).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Tymovirales; Alphaflexiviridae; Botrexvirus.
OX   NCBI_TaxID=686947;
OH   NCBI_TaxID=40559; Botryotinia fuckeliana (Noble rot fungus) (Botrytis cinerea).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=16172841; DOI=10.1007/s00705-005-0621-y;
RA   Howitt R.L., Beever R.E., Pearson M.N., Forster R.L.;
RT   "Genome characterization of a flexuous rod-shaped mycovirus, Botrytis virus
RT   X, reveals high amino acid identity to genes from plant 'potex-like'
RT   viruses.";
RL   Arch. Virol. 151:563-579(2006).
CC   -!- FUNCTION: Required for genome encapsidation. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the potexvirus capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; AY055762; AAL17724.1; -; Genomic_RNA.
DR   RefSeq; NP_932309.1; NC_005132.1.
DR   SMR; Q6YNQ5; -.
DR   GeneID; 2943230; -.
DR   KEGG; vg:2943230; -.
DR   Proteomes; UP000001664; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   InterPro; IPR000052; Pltvir_coat.
DR   Pfam; PF00286; Flexi_CP; 1.
DR   PRINTS; PR00232; POTXCARLCOAT.
DR   PROSITE; PS00418; POTEX_CARLAVIRUS_COAT; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Helical capsid protein; Reference proteome; Virion.
FT   CHAIN           1..400
FT                   /note="Capsid protein"
FT                   /id="PRO_0000401068"
FT   REGION          1..54
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        18..36
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        37..53
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   400 AA;  43503 MW;  68FB45B43A2104DD CRC64;
     MDPNLDQDTL PTHEEIDNDV DSAEEEPPEP PLLPDDIDDD DSHGSRTRRQ VKPPPELLRA
     VGACLISGHY DGGNYFRWQQ SIAALYAKAG YAGDIRFHQA AIQEYALDPV LPAPRVSYDL
     LVAHAGLRYQ ALLNEQLRTG KTPPADEALK DAVRKAAQAA YDNAVKTGDY TPLIDIAFKG
     VDINKHASDV AQLAKMSVTM DGTHIKFTAG EMPKDKVITS NSMASPNTVM NILNLITTSA
     NVTAVTCGIE FAIACAHQGS SRYTRHTGTS TGGSTFELIA AHVKEHCTIR QFCSYFAKVV
     WNHLLTHATP PVNWAKHGFT LDSRYAAFDF FDAVTNAAAL PPKNGLIRAP TSEEIRAHNL
     NAHLLINASR QDDQVSSSAQ YTAAIAQAGG FKRPQIGWGE
 
 
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