Y1278_ARATH
ID Y1278_ARATH Reviewed; 289 AA.
AC Q9C6N2;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=UPF0725 protein At1g27860;
GN OrderedLocusNames=At1g27860; ORFNames=F28L5.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
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DR EMBL; AC079280; AAG50577.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30885.1; -; Genomic_DNA.
DR PIR; G86403; G86403.
DR RefSeq; NP_174107.1; NM_102551.1.
DR AlphaFoldDB; Q9C6N2; -.
DR SMR; Q9C6N2; -.
DR PaxDb; Q9C6N2; -.
DR PRIDE; Q9C6N2; -.
DR ProteomicsDB; 242385; -.
DR EnsemblPlants; AT1G27860.1; AT1G27860.1; AT1G27860.
DR GeneID; 839679; -.
DR Gramene; AT1G27860.1; AT1G27860.1; AT1G27860.
DR KEGG; ath:AT1G27860; -.
DR Araport; AT1G27860; -.
DR TAIR; locus:2029846; AT1G27860.
DR HOGENOM; CLU_053767_0_1_1; -.
DR OMA; GKSAHVY; -.
DR OrthoDB; 1125405at2759; -.
DR PhylomeDB; Q9C6N2; -.
DR PRO; PR:Q9C6N2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR Genevisible; Q9C6N2; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..289
FT /note="UPF0725 protein At1g27860"
FT /id="PRO_0000363134"
FT REGION 266..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 289 AA; 33339 MW; 753AA27BED0F840C CRC64;
MPTEDRVCFT WEEYARHVRE YWRGVAESDG FDSEDIRSPV VLTGLFHYDC QSGRHYPEPL
LGTSFELAAL LKFNKTMNLT SSYYITLLAH DPSLEKTFQV RVDEREYGSL DLTVAIARPK
KDQNEVSDGV FQGPLPDWPS EDALRHDRNR FYELEISEWQ ATDWISLYLK LLILATDRGM
FVQTGLPQVQ ILEVVIETEE ENEKPPDKRL NARRAHVYIT FTGLPKSPRL VEIGEHVERK
AIIRRVIDAS GYLTLLGKFW SGKDTDQQRS MTLPSGEQAE SSKKRPRLS