Y1312_METJA
ID Y1312_METJA Reviewed; 321 AA.
AC Q58708;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=UPF0026 protein MJ1312;
GN OrderedLocusNames=MJ1312;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000305};
CC Note=Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3
CC cysteines and an exchangeable S-adenosyl-L-methionine. {ECO:0000305};
CC -!- SIMILARITY: Belongs to the UPF0026 family. {ECO:0000305}.
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DR EMBL; L77117; AAB99319.1; -; Genomic_DNA.
DR PIR; G64463; G64463.
DR RefSeq; WP_010870829.1; NC_000909.1.
DR AlphaFoldDB; Q58708; -.
DR SMR; Q58708; -.
DR STRING; 243232.MJ_1312; -.
DR DNASU; 1452214; -.
DR EnsemblBacteria; AAB99319; AAB99319; MJ_1312.
DR GeneID; 1452214; -.
DR KEGG; mja:MJ_1312; -.
DR eggNOG; arCOG00953; Archaea.
DR HOGENOM; CLU_058377_0_0_2; -.
DR InParanoid; Q58708; -.
DR OMA; CIYCELG; -.
DR OrthoDB; 73459at2157; -.
DR PhylomeDB; Q58708; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.20.20.70; -; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR006638; Elp3/MiaB/NifB.
DR InterPro; IPR040084; GTPase_Obg.
DR InterPro; IPR007197; rSAM.
DR Pfam; PF04055; Radical_SAM; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SFLD; SFLDG01083; Uncharacterised_Radical_SAM_Su; 1.
DR SMART; SM00729; Elp3; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 3: Inferred from homology;
KW 4Fe-4S; Iron; Iron-sulfur; Metal-binding; Reference proteome;
KW S-adenosyl-L-methionine.
FT CHAIN 1..321
FT /note="UPF0026 protein MJ1312"
FT /id="PRO_0000217863"
FT DOMAIN 11..236
FT /note="Radical SAM core"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01266"
FT BINDING 27
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_note="4Fe-4S-S-AdoMet"
FT /evidence="ECO:0000255"
FT BINDING 31
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_note="4Fe-4S-S-AdoMet"
FT /evidence="ECO:0000255"
FT BINDING 34
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_note="4Fe-4S-S-AdoMet"
FT /evidence="ECO:0000255"
SQ SEQUENCE 321 AA; 37131 MW; 0035C4E648DA607F CRC64;
MTIAFGPVPS RRLGKSLGIN SIPCKFCSYD CVYCQVGRTI NKTIERREFY SPEDIFKSVE
ERIGKLNNEK IDYLTFVADG EPTLDINLSK EVEMLRDFDI PIAIITNSSL IWREDVRNDI
LNFDLVSFKV DSVDEKIWRE INRPHKDLVL DKILEGMIAF RDNYKGELIT ETMILGSIKY
TEESIIKTAE FLKELNPNKC YLNTPIRPPS EKYIKPPKIE VITKILAIFN EIIGKNKIKL
LGKFEGNEFI FSENVEEDIL AITSVHPMRE EVIKELLNKS NISFDIINKM VNEGKLIKLE
YDGKVFYMKN IKSRDKNVSN P