CAPSD_BPPM2
ID CAPSD_BPPM2 Reviewed; 269 AA.
AC P15794; Q9XJR7;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 10-JUN-2008, sequence version 2.
DT 29-SEP-2021, entry version 54.
DE RecName: Full=Major capsid protein P2;
DE Short=Protein II;
GN Name=II;
OS Pseudoalteromonas phage PM2 (Bacteriophage PM2).
OC Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes;
OC Vinavirales; Corticoviridae; Corticovirus.
OX NCBI_TaxID=10661;
OH NCBI_TaxID=28107; Pseudoalteromonas espejiana.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=10502514; DOI=10.1006/viro.1999.9837;
RA Maennistoe R.H., Kivelae H.M., Paulin L., Bamford D.H., Bamford J.K.;
RT "The complete genome sequence of PM2, the first lipid-containing bacterial
RT virus to be isolated.";
RL Virology 262:355-363(1999).
RN [2]
RP PROTEIN SEQUENCE OF 1-39.
RX PubMed=964262; DOI=10.1111/j.1432-1033.1976.tb10772.x;
RA Hinnen R., Chassin R., Schaefer R., Franklin R.M., Hitz H., Schaefer D.;
RT "Structure and synthesis of a lipid-containing bacteriophage. Purification,
RT chemical composition, and partial sequences of the structural proteins.";
RL Eur. J. Biochem. 68:139-152(1976).
RN [3]
RP PROTEIN SEQUENCE OF 1-10.
RX PubMed=10502515; DOI=10.1006/viro.1999.9838;
RA Kivelae H.M., Maennistoe R.H., Kalkkinen N., Bamford D.H.;
RT "Purification and protein composition of PM2, the first lipid-containing
RT bacterial virus to be isolated.";
RL Virology 262:364-374(1999).
RN [4]
RP SUBUNIT, AND SUBCELLULAR LOCATION.
RX PubMed=12134022; DOI=10.1128/jvi.76.16.8169-8178.2002;
RA Kivelae H.M., Kalkkinen N., Bamford D.H.;
RT "Bacteriophage PM2 has a protein capsid surrounding a spherical
RT proteinaceous lipid core.";
RL J. Virol. 76:8169-8178(2002).
CC -!- FUNCTION: Major capsid protein.
CC -!- SUBUNIT: Homotrimer. {ECO:0000305|PubMed:12134022}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:12134022}.
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DR EMBL; AF155037; AAD43549.1; -; Genomic_DNA.
DR PIR; A12629; A12629.
DR RefSeq; NP_049903.1; NC_000867.1.
DR PDB; 2VVF; X-ray; 2.50 A; A/B/C/D/E/F=1-269.
DR PDB; 2W0C; X-ray; 7.00 A; A/B/C/D/E/F/G/H/I/J=1-269.
DR PDBsum; 2VVF; -.
DR PDBsum; 2W0C; -.
DR SMR; P15794; -.
DR PRIDE; P15794; -.
DR GeneID; 1262043; -.
DR KEGG; vg:1262043; -.
DR EvolutionaryTrace; P15794; -.
DR Proteomes; UP000002136; Genome.
DR GO; GO:0098017; C:viral capsid, major subunit; IDA:CACAO.
DR InterPro; IPR041377; P2_N.
DR Pfam; PF18628; P2_N; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Direct protein sequencing;
KW Reference proteome; Virion.
FT CHAIN 1..269
FT /note="Major capsid protein P2"
FT /id="PRO_0000089986"
FT VARIANT 19
FT /note="C -> R"
FT CONFLICT 9
FT /note="S -> C (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 16
FT /note="G -> C (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 19..20
FT /note="CS -> EP (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 38
FT /note="G -> I (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
FT STRAND 3..6
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 18..23
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 25..39
FT /evidence="ECO:0007829|PDB:2VVF"
FT HELIX 41..43
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 44..51
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 54..61
FT /evidence="ECO:0007829|PDB:2VVF"
FT HELIX 63..71
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 80..84
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 93..95
FT /evidence="ECO:0007829|PDB:2VVF"
FT HELIX 97..102
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 105..107
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 114..120
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 128..137
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 143..154
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 156..161
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 171..178
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 180..189
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 192..199
FT /evidence="ECO:0007829|PDB:2VVF"
FT HELIX 200..209
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 218..223
FT /evidence="ECO:0007829|PDB:2VVF"
FT HELIX 229..231
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 232..234
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 242..250
FT /evidence="ECO:0007829|PDB:2VVF"
FT STRAND 252..263
FT /evidence="ECO:0007829|PDB:2VVF"
SQ SEQUENCE 269 AA; 30199 MW; 3CD9936A484BB1D0 CRC64;
MRSFLNLNSI PNVAAGNSCS IKLPIGQTYE VIDLRYSGVT PSQIKNVRVE LDGRLLSTYK
TLNDLILENT RHKRKIKAGV VSFHFVRPEM KGVNVTDLVQ QRMFALGTVG LTTCEIKFDI
DEAAAGPKLS AIAQKSVGTA PSWLTMRRNF FKQLNNGTTE IADLPRPVGY RIAAIHIKAA
GVDAVEFQID GTKWRDLLKK ADNDYILEQY GKAVLDNTYT IDFMLEGDVY QSVLLDQMIQ
DLRLKIDSTM DEQAEIIVEY MGVWSRNGF