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CAPSD_BYDVN
ID   CAPSD_BYDVN             Reviewed;         204 AA.
AC   P27578;
DT   01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1992, sequence version 1.
DT   29-SEP-2021, entry version 58.
DE   RecName: Full=Major capsid protein;
DE   AltName: Full=Coat protein;
DE            Short=CP;
GN   ORFNames=ORF3;
OS   Barley yellow dwarf virus (isolate NY-RPV) (BYDV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Luteovirus; unclassified Luteovirus.
OX   NCBI_TaxID=12039;
OH   NCBI_TaxID=146531; Avena byzantina.
OH   NCBI_TaxID=4498; Avena sativa (Oat).
OH   NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH   NCBI_TaxID=4521; Lolium multiflorum (Italian ryegrass) (Lolium perenne subsp. multiflorum).
OH   NCBI_TaxID=4522; Lolium perenne (Perennial ryegrass).
OH   NCBI_TaxID=4530; Oryza sativa (Rice).
OH   NCBI_TaxID=4550; Secale cereale (Rye).
OH   NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH   NCBI_TaxID=4577; Zea mays (Maize).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2273382; DOI=10.1099/0022-1317-71-12-2791;
RA   Vincent J.R., Ueng P.P., Lister R.M., Larkins B.A.;
RT   "Nucleotide sequences of coat protein genes for three isolates of barley
RT   yellow dwarf virus and their relationships to other luteovirus coat protein
RT   sequences.";
RL   J. Gen. Virol. 71:2791-2799(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=1840612; DOI=10.1099/0022-1317-72-10-2347;
RA   Larkins B.A., Lister R.M., Vincent J.R.;
RT   "Nucleotide sequence analysis and genomic organization of the NY-RPV
RT   isolate of barley yellow dwarf virus.";
RL   J. Gen. Virol. 72:2347-2355(1991).
CC   -!- FUNCTION: Major capsid protein.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- MISCELLANEOUS: The N-terminal region like those of many plant virus
CC       capsid proteins is highly basic. It has been suggested that these
CC       regions may be involved in protein-RNA interaction.
CC   -!- SIMILARITY: Belongs to the luteoviruses capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; D10206; BAA01055.1; -; Genomic_RNA.
DR   EMBL; X17259; CAA35160.1; -; Genomic_RNA.
DR   EMBL; L25299; AAA42869.1; -; Genomic_RNA.
DR   SMR; P27578; -.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR001517; Luteo_coat.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00894; Luteo_coat; 1.
DR   PRINTS; PR00915; LUTEOGP1COAT.
PE   3: Inferred from homology;
KW   Capsid protein; T=3 icosahedral capsid protein; Virion.
FT   CHAIN           1..204
FT                   /note="Major capsid protein"
FT                   /id="PRO_0000222407"
FT   REGION          1..74
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   204 AA;  22187 MW;  CC40B07F062A9055 CRC64;
     MSTVVLRSNG NGSRRRRQRV ARRRPAARTQ PVVVVASNGP ARRGRRRRPV GPRRGRTPRS
     GGGSRGETFV FSKDSLAGNS SGSITFGPSL SEYPAFQNGV LKAYHEYKIT NCVLQFVSEA
     SSTAAGSISY ELDPHCKASS LASTINKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY
     KGNGASSVAG SFKITLRVQL QNPK
 
 
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