CAPSD_BYDVN
ID CAPSD_BYDVN Reviewed; 204 AA.
AC P27578;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 1.
DT 29-SEP-2021, entry version 58.
DE RecName: Full=Major capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
GN ORFNames=ORF3;
OS Barley yellow dwarf virus (isolate NY-RPV) (BYDV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Luteovirus; unclassified Luteovirus.
OX NCBI_TaxID=12039;
OH NCBI_TaxID=146531; Avena byzantina.
OH NCBI_TaxID=4498; Avena sativa (Oat).
OH NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH NCBI_TaxID=4521; Lolium multiflorum (Italian ryegrass) (Lolium perenne subsp. multiflorum).
OH NCBI_TaxID=4522; Lolium perenne (Perennial ryegrass).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=4550; Secale cereale (Rye).
OH NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2273382; DOI=10.1099/0022-1317-71-12-2791;
RA Vincent J.R., Ueng P.P., Lister R.M., Larkins B.A.;
RT "Nucleotide sequences of coat protein genes for three isolates of barley
RT yellow dwarf virus and their relationships to other luteovirus coat protein
RT sequences.";
RL J. Gen. Virol. 71:2791-2799(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1840612; DOI=10.1099/0022-1317-72-10-2347;
RA Larkins B.A., Lister R.M., Vincent J.R.;
RT "Nucleotide sequence analysis and genomic organization of the NY-RPV
RT isolate of barley yellow dwarf virus.";
RL J. Gen. Virol. 72:2347-2355(1991).
CC -!- FUNCTION: Major capsid protein.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- MISCELLANEOUS: The N-terminal region like those of many plant virus
CC capsid proteins is highly basic. It has been suggested that these
CC regions may be involved in protein-RNA interaction.
CC -!- SIMILARITY: Belongs to the luteoviruses capsid protein family.
CC {ECO:0000305}.
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DR EMBL; D10206; BAA01055.1; -; Genomic_RNA.
DR EMBL; X17259; CAA35160.1; -; Genomic_RNA.
DR EMBL; L25299; AAA42869.1; -; Genomic_RNA.
DR SMR; P27578; -.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR001517; Luteo_coat.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00894; Luteo_coat; 1.
DR PRINTS; PR00915; LUTEOGP1COAT.
PE 3: Inferred from homology;
KW Capsid protein; T=3 icosahedral capsid protein; Virion.
FT CHAIN 1..204
FT /note="Major capsid protein"
FT /id="PRO_0000222407"
FT REGION 1..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 204 AA; 22187 MW; CC40B07F062A9055 CRC64;
MSTVVLRSNG NGSRRRRQRV ARRRPAARTQ PVVVVASNGP ARRGRRRRPV GPRRGRTPRS
GGGSRGETFV FSKDSLAGNS SGSITFGPSL SEYPAFQNGV LKAYHEYKIT NCVLQFVSEA
SSTAAGSISY ELDPHCKASS LASTINKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY
KGNGASSVAG SFKITLRVQL QNPK