CAPSD_BYDVP
ID CAPSD_BYDVP Reviewed; 200 AA.
AC P09510;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1989, sequence version 1.
DT 29-SEP-2021, entry version 78.
DE RecName: Full=Major capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
GN ORFNames=ORF3;
OS Barley yellow dwarf virus (isolate PAV) (BYDV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Luteovirus.
OX NCBI_TaxID=2169986;
OH NCBI_TaxID=146531; Avena byzantina.
OH NCBI_TaxID=4498; Avena sativa (Oat).
OH NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH NCBI_TaxID=4521; Lolium multiflorum (Italian ryegrass) (Lolium perenne subsp. multiflorum).
OH NCBI_TaxID=4522; Lolium perenne (Perennial ryegrass).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=4550; Secale cereale (Rye).
OH NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=3399386; DOI=10.1093/nar/16.13.6097;
RA Miller W.A., Waterhouse P.M., Gerlach W.L.;
RT "Sequence and organization of barley yellow dwarf virus genomic RNA.";
RL Nucleic Acids Res. 16:6097-6111(1988).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=3388774; DOI=10.1016/0042-6822(88)90690-3;
RA Miller W.A., Waterhouse P.M., Kortt A.A., Gerlach W.L.;
RT "Sequence and identification of the barley yellow dwarf virus coat protein
RT gene.";
RL Virology 165:306-309(1988).
CC -!- FUNCTION: Major capsid protein.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- MISCELLANEOUS: The N-terminal region like those of many plant virus
CC capsid proteins is highly basic. It has been suggested that these
CC regions may be involved in protein-RNA interaction.
CC -!- SIMILARITY: Belongs to the luteoviruses capsid protein family.
CC {ECO:0000305}.
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DR EMBL; X07653; CAA30493.1; -; Genomic_RNA.
DR EMBL; M21347; AAA87366.1; -; Genomic_RNA.
DR SMR; P09510; -.
DR Proteomes; UP000006722; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR001517; Luteo_coat.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00894; Luteo_coat; 1.
DR PRINTS; PR00915; LUTEOGP1COAT.
PE 3: Inferred from homology;
KW Capsid protein; Reference proteome; T=3 icosahedral capsid protein; Virion.
FT CHAIN 1..200
FT /note="Major capsid protein"
FT /id="PRO_0000222408"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 33..52
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 200 AA; 22047 MW; E105AE98E9E12DD7 CRC64;
MNSVGRRGPR RANQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANFVFRPTGG
TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASANTA
GAIFIELDTA CKQSALGSYI NSFTISKTAS KTFRSEAING KEFQESTIDQ FWMLYKANGT
TTDTAGQFII TMSVSLMTAK