CAPSD_BYDVR
ID CAPSD_BYDVR Reviewed; 200 AA.
AC Q00011;
DT 01-DEC-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-1992, sequence version 1.
DT 29-SEP-2021, entry version 59.
DE RecName: Full=Major capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
GN ORFNames=ORF3;
OS Barley yellow dwarf virus (isolate P-PAV) (BYDV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Luteovirus.
OX NCBI_TaxID=31724;
OH NCBI_TaxID=146531; Avena byzantina.
OH NCBI_TaxID=4498; Avena sativa (Oat).
OH NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH NCBI_TaxID=4521; Lolium multiflorum (Italian ryegrass) (Lolium perenne subsp. multiflorum).
OH NCBI_TaxID=4522; Lolium perenne (Perennial ryegrass).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=4550; Secale cereale (Rye).
OH NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2273382; DOI=10.1099/0022-1317-71-12-2791;
RA Vincent J.R., Ueng P.P., Lister R.M., Larkins B.A.;
RT "Nucleotide sequences of coat protein genes for three isolates of barley
RT yellow dwarf virus and their relationships to other luteovirus coat protein
RT sequences.";
RL J. Gen. Virol. 71:2791-2799(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1538199; DOI=10.1099/0022-1317-73-2-487;
RA Ueng P.P., Vincent J.R., Kawata E.E., Lei C.H., Lister R.M., Larkins B.A.;
RT "Nucleotide sequence analysis of the genomes of the MAV-PS1 and P-PAV
RT isolates of barley yellow dwarf virus.";
RL J. Gen. Virol. 73:487-492(1992).
CC -!- FUNCTION: Major capsid protein.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- MISCELLANEOUS: The N-terminal region like those of many plant virus
CC capsid proteins is highly basic. It has been suggested that these
CC regions may be involved in protein-RNA interaction.
CC -!- SIMILARITY: Belongs to the luteoviruses capsid protein family.
CC {ECO:0000305}.
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DR EMBL; X17261; CAA35164.1; -; Genomic_RNA.
DR EMBL; D11032; BAA01787.1; -; Genomic_RNA.
DR SMR; Q00011; -.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR001517; Luteo_coat.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00894; Luteo_coat; 1.
DR PRINTS; PR00915; LUTEOGP1COAT.
PE 3: Inferred from homology;
KW Capsid protein; T=3 icosahedral capsid protein; Virion.
FT CHAIN 1..200
FT /note="Major capsid protein"
FT /id="PRO_0000222409"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..26
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VARIANT 124
FT /note="F -> L"
SQ SEQUENCE 200 AA; 21978 MW; 4E667612BEC54020 CRC64;
MNSVGRRGPR RANQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANPVFRPTGG
TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASATTA
GAIFIELDTA CKQSALGSYI NSFTISRTAA KVFRAEAING KEFQESTIDQ FWMLYKANGT
TTDTAGQFII TMSVSLMTAK