CAPSD_CAMVC
ID CAPSD_CAMVC Reviewed; 488 AA.
AC P03543;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 21-JUL-1986, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Capsid protein;
DE Short=CP;
DE AltName: Full=Coat protein;
GN ORFNames=ORF IV;
OS Cauliflower mosaic virus (strain CM-1841) (CaMV).
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Caulimoviridae; Caulimovirus.
OX NCBI_TaxID=10644;
OH NCBI_TaxID=3702; Arabidopsis thaliana (Mouse-ear cress).
OH NCBI_TaxID=3705; Brassica.
OH NCBI_TaxID=3725; Raphanus.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=6269062; DOI=10.1093/nar/9.12.2871;
RA Gardner R.C., Howarth A.J., Hahn P., Brown-Luedi M., Shepherd R.J.,
RA Messing J.;
RT "The complete nucleotide sequence of an infectious clone of cauliflower
RT mosaic virus by M13mp7 shotgun sequencing.";
RL Nucleic Acids Res. 9:2871-2888(1981).
CC -!- FUNCTION: Self assembles to form an icosahedral capsid, about 50 nm in
CC diameter, nm, composed of 420 subunits of the viral capsid protein. The
CC capsid encapsulates the genomic dsDNA. Following virus entry into host
CC cell, provides nuclear import of the viral genome. Virus particles do
CC not enter the nucleus, but dock at the nuclear membrane through the
CC interaction with host importins (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts (via nuclear localization signal) with host importin
CC alpha. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the caulimoviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; V00140; CAA23455.1; -; Genomic_DNA.
DR PIR; A04154; VCCV4C.
DR Proteomes; UP000008438; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0039620; C:T=7 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0075732; P:viral penetration into host nucleus; IEA:UniProtKB-KW.
DR InterPro; IPR001988; Caulimo_coat.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PRINTS; PR00221; CAULIMOCOAT.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 3: Inferred from homology;
KW Capsid protein; Host nucleus; Metal-binding; Reference proteome;
KW T=7 icosahedral capsid protein; Viral penetration into host nucleus;
KW Virion; Virus entry into host cell; Zinc; Zinc-finger.
FT CHAIN 1..488
FT /note="Capsid protein"
FT /id="PRO_0000222029"
FT ZN_FING 410..427
FT /note="CCHC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 80..143
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 463..488
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 121..124
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
FT COMPBIAS 91..130
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 488 AA; 56686 MW; CF244DAA01378282 CRC64;
MAESILDRTI NRFWYNLGED CLSESQFDLM IRLMEESLDG DQIIDLTSLP SDNLQVEQVM
TTTDDSISEE SEFLLAIGEI SEDESDSGEE PEFEQVRMDR TGGTEIPKEE DGEGPSRYNE
RKRKTPEDRY FPTQPKTIPG QKQTSMGMLN IDCQINRRTL IDDWAAEIGL IVKTNREDYL
DPETILLLME HKTSGIAKEL IRNTRWNRTT GDIIEQVINA MYTMFLGLNY SDNKVAEKID
EQEKAKIRMT KLQLFDICYL EEFTCDYEKN MYKTEMADFP GYINQYLSKI PIIGEKALTR
FRHEANGTSI YSLGFAAKIV KEELSKICDL SKKQKKLKKF NKKCCSIGEA SVEYGGKKTS
KKKYHKRYKK RYKVYKPYKK KKKFRSGKYF KPKEKKGSKR KYCPKGKKDC RCWICNIEGH
YANECPNRQS SEKAHILQQA ENLGLQPVEE PYEGVQEVFI LEYKEEEEET STEESDDESS
TSEDSDSD