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CAPSD_CAMVN
ID   CAPSD_CAMVN             Reviewed;         488 AA.
AC   Q00956;
DT   01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT   01-APR-1993, sequence version 1.
DT   23-FEB-2022, entry version 86.
DE   RecName: Full=Capsid protein;
DE            Short=CP;
DE   AltName: Full=Coat protein;
GN   ORFNames=ORF IV;
OS   Cauliflower mosaic virus (strain NY8153) (CaMV).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Caulimoviridae; Caulimovirus.
OX   NCBI_TaxID=31557;
OH   NCBI_TaxID=3702; Arabidopsis thaliana (Mouse-ear cress).
OH   NCBI_TaxID=3705; Brassica.
OH   NCBI_TaxID=3725; Raphanus.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=16653000; DOI=10.1104/pp.100.1.542;
RA   Chenault K.D., Steffens D.L., Melcher U.K.;
RT   "Nucleotide sequence of cauliflower mosaic virus isolate NY8153.";
RL   Plant Physiol. 100:542-545(1992).
CC   -!- FUNCTION: Self assembles to form an icosahedral capsid, about 50 nm in
CC       diameter, nm, composed of 420 subunits of the viral capsid protein. The
CC       capsid encapsulates the genomic dsDNA. Following virus entry into host
CC       cell, provides nuclear import of the viral genome. Virus particles do
CC       not enter the nucleus, but dock at the nuclear membrane through the
CC       interaction with host importins (By similarity). {ECO:0000250}.
CC   -!- SUBUNIT: Interacts (via nuclear localization signal) with host importin
CC       alpha. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host nucleus {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the caulimoviridae capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; M90541; AAA46357.1; -; Genomic_DNA.
DR   Proteomes; UP000008441; Genome.
DR   GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0039620; C:T=7 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR   GO; GO:0075732; P:viral penetration into host nucleus; IEA:UniProtKB-KW.
DR   InterPro; IPR001988; Caulimo_coat.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PRINTS; PR00221; CAULIMOCOAT.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF57756; SSF57756; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Host nucleus; Metal-binding;
KW   T=7 icosahedral capsid protein; Viral penetration into host nucleus;
KW   Virion; Virus entry into host cell; Zinc; Zinc-finger.
FT   CHAIN           1..488
FT                   /note="Capsid protein"
FT                   /id="PRO_0000222032"
FT   ZN_FING         410..427
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   REGION          78..137
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          463..488
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           120..123
FT                   /note="Nuclear localization signal"
FT                   /evidence="ECO:0000250"
FT   COMPBIAS        91..129
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   488 AA;  56967 MW;  9316E11F7EDE46C9 CRC64;
     MAESILDRTI NRFWYNLGED CLSESQFDLM IRLMEESLSG DQIIDLTSLP SDNLQVEQVM
     TTTEDSISEE SEFLLAIGET SEDESDSGEE PEFEQVRMDR TGGTEIPKEE DGEPSRYNER
     KRKTTEDRYF PTQPKTIPRQ KQTSMGMLNI DCQTNRRTLI DDWAAEIGLI VKTNREDYLN
     PETILLLMEH KTSGIAKELI RNTRWNRTTG DIIEQVIDRM YTMFLGLNYS DNKVAEKIDE
     QEKAKIRMTK LQLCDICYLE EFTCDYEKNM YKTELADFPG YINQYLSKIP IIGEKALTRF
     RHEANGTSIY SLGFERKICK EELSKIRDLS KNEKKLKKFN KKCCSIEEAS AEYGCKKTST
     KKYHKKRYKK KYKAYKPYKK KKKFRSGKYF KPKEKKGSKQ KYCPKGKKDC RCWICNIEGH
     YANECPNRQS SEKAHILQQA EKVGLQPIEA PYEGVQEVFI LEYKEEEEET STEESDDESS
     TSEDSDSD
 
 
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