CAPSD_CGMVS
ID CAPSD_CGMVS Reviewed; 161 AA.
AC P69474; P19521;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 12-AUG-2020, entry version 60.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
GN Name=CP;
OS Cucumber green mottle mosaic virus (strain watermelon SH) (CGMMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Virgaviridae; Tobamovirus.
OX NCBI_TaxID=12236;
OH NCBI_TaxID=3653; Citrullus.
OH NCBI_TaxID=3659; Cucumis sativus (Cucumber).
OH NCBI_TaxID=3668; Lagenaria siceraria (Bottle gourd) (Lagenaria leucantha).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1856687; DOI=10.1099/0022-1317-72-7-1487;
RA Ugaki M., Tomiyama M., Kakutani T., Hidaka S., Kiguchi T., Nagata R.,
RA Sato T., Motoyoshi F., Nishiguchi M.;
RT "The complete nucleotide sequence of cucumber green mottle mosaic virus (SH
RT strain) genomic RNA.";
RL J. Gen. Virol. 72:1487-1495(1991).
CC -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC about 18 nm in diameter with a central canal enclosing the viral
CC genomic RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; D12505; BAA02071.1; -; Genomic_RNA.
DR PIR; JQ1160; VCTMSH.
DR RefSeq; NP_044580.1; NC_001801.1.
DR SMR; P69474; -.
DR GeneID; 1494062; -.
DR KEGG; vg:1494062; -.
DR Proteomes; UP000008447; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.120.70; -; 1.
DR InterPro; IPR001337; TMV-like_coat.
DR InterPro; IPR036417; TMV-like_coat_sf.
DR Pfam; PF00721; TMV_coat; 1.
DR SUPFAM; SSF47195; SSF47195; 1.
PE 3: Inferred from homology;
KW Acetylation; Capsid protein; Helical capsid protein; Reference proteome;
KW Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT /evidence="ECO:0000250"
FT CHAIN 2..161
FT /note="Capsid protein"
FT /id="PRO_0000144928"
FT MOD_RES 2
FT /note="N-acetylalanine; by host"
FT /evidence="ECO:0000250"
SQ SEQUENCE 161 AA; 17394 MW; 2119F359A096D925 CRC64;
MAYNPITPSK LIAFSASYVP VRTLLNFLVA SQGTAFQTQA GRDSFRESLS ALPSSVVDIN
SRFPDAGFYA FLNGPVLRPI FVSLLSSTDT RNRVIEVVDP SNPTTAESLN AVKRTDDAST
AARAEIDNLI ESISKGFDVY DRASFEAAFS VVWSEATTSK A