Y1390_ARATH
ID Y1390_ARATH Reviewed; 272 AA.
AC Q681Q7; Q67YX5; Q94B37; Q9ZWB0;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=Uncharacterized protein At1g03900;
GN OrderedLocusNames=At1g03900; ORFNames=F21M11.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- INTERACTION:
CC Q681Q7; Q17TI5: BRX; NbExp=4; IntAct=EBI-4440643, EBI-4426649;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD10694.1; Type=Erroneous gene model prediction; Note=The predicted gene At1g03900 has been split into 2 genes: At1g03900 and At1g03905.; Evidence={ECO:0000305};
CC Sequence=AAK68815.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=AAL66930.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AC003027; AAD10694.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27630.1; -; Genomic_DNA.
DR EMBL; AY042875; AAK68815.1; ALT_FRAME; mRNA.
DR EMBL; AY072515; AAL66930.1; ALT_FRAME; mRNA.
DR EMBL; AK175162; BAD42925.1; -; mRNA.
DR EMBL; AK175560; BAD43323.1; -; mRNA.
DR EMBL; AK176343; BAD44106.1; -; mRNA.
DR EMBL; AK176412; BAD44175.1; -; mRNA.
DR PIR; G86169; G86169.
DR RefSeq; NP_563693.1; NM_100270.4.
DR AlphaFoldDB; Q681Q7; -.
DR SMR; Q681Q7; -.
DR BioGRID; 24613; 6.
DR IntAct; Q681Q7; 6.
DR STRING; 3702.AT1G03900.1; -.
DR iPTMnet; Q681Q7; -.
DR PaxDb; Q681Q7; -.
DR PRIDE; Q681Q7; -.
DR ProteomicsDB; 243049; -.
DR EnsemblPlants; AT1G03900.1; AT1G03900.1; AT1G03900.
DR GeneID; 839378; -.
DR Gramene; AT1G03900.1; AT1G03900.1; AT1G03900.
DR KEGG; ath:AT1G03900; -.
DR Araport; AT1G03900; -.
DR TAIR; locus:2024208; AT1G03900.
DR eggNOG; KOG2500; Eukaryota.
DR HOGENOM; CLU_069884_1_0_1; -.
DR OMA; NEGHRAQ; -.
DR OrthoDB; 1605812at2759; -.
DR PhylomeDB; Q681Q7; -.
DR PRO; PR:Q681Q7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q681Q7; baseline and differential.
DR Genevisible; Q681Q7; AT.
DR GO; GO:0030125; C:clathrin vesicle coat; IBA:GO_Central.
DR GO; GO:0042626; F:ATPase-coupled transmembrane transporter activity; ISS:TAIR.
DR GO; GO:0006897; P:endocytosis; IEA:InterPro.
DR GO; GO:0016192; P:vesicle-mediated transport; IBA:GO_Central.
DR CDD; cd13228; PHear_NECAP; 1.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR012466; NECAP_PHear.
DR InterPro; IPR011993; PH-like_dom_sf.
DR Pfam; PF07933; DUF1681; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..272
FT /note="Uncharacterized protein At1g03900"
FT /id="PRO_0000250668"
FT REGION 136..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 174..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..188
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..223
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..266
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 191
FT /note="S -> P (in Ref. 4; BAD44106)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 272 AA; 29795 MW; D3CBE0F45F65927E CRC64;
MSFEEEEEEE TFEHTLLVVR EVSVYKIPPR TTSGGYKCGE WLQSDKIWSG RLRVVSCKDR
CEIRLEDSNS GDLFAACFVD PGRRENSVEP SLDSSRYFVL RIDDGRGKYA FIGLGFAERN
EAFDFNVALS DHEKYVRREK EKETGETSES DNHIDIHPAV NHRLKEGETI RINVKPKPTT
NGTGMLSAAL SGTGKPKPLA LAPPPKAAGV TRSPLPPPPN DPVASRIASD GCKESRRNEP
LSDLSQLKKN LPSTAGSGSS KSTGAASGWA AF
