ID   Y1411_THEKO             Reviewed;         133 AA.
AC   Q5JH13;
DT   12-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT   15-FEB-2005, sequence version 1.
DT   03-AUG-2022, entry version 84.
DE   RecName: Full=UPF0292 protein TK1411 {ECO:0000255|HAMAP-Rule:MF_01095};
GN   OrderedLocusNames=TK1411;
OS   Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS   (Pyrococcus kodakaraensis (strain KOD1)).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Thermococcus.
OX   NCBI_TaxID=69014;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX   PubMed=15710748; DOI=10.1101/gr.3003105;
RA   Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT   "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT   kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL   Genome Res. 15:352-363(2005).
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01095};
CC       Note=Binds two Mg(2+) per subunit. {ECO:0000255|HAMAP-Rule:MF_01095};
CC   -!- SIMILARITY: Belongs to the UPF0292 family. {ECO:0000255|HAMAP-
CC       Rule:MF_01095}.
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DR   EMBL; AP006878; BAD85600.1; -; Genomic_DNA.
DR   RefSeq; WP_011250362.1; NC_006624.1.
DR   AlphaFoldDB; Q5JH13; -.
DR   SMR; Q5JH13; -.
DR   STRING; 69014.TK1411; -.
DR   PRIDE; Q5JH13; -.
DR   EnsemblBacteria; BAD85600; BAD85600; TK1411.
DR   GeneID; 3234728; -.
DR   KEGG; tko:TK1411; -.
DR   PATRIC; fig|69014.16.peg.1373; -.
DR   eggNOG; arCOG01486; Archaea.
DR   HOGENOM; CLU_140789_3_0_2; -.
DR   InParanoid; Q5JH13; -.
DR   OMA; VMILTDF; -.
DR   OrthoDB; 99443at2157; -.
DR   PhylomeDB; Q5JH13; -.
DR   Proteomes; UP000000536; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd01027; TOPRIM_RNase_M5_like; 1.
DR   HAMAP; MF_01095; UPF0292; 1.
DR   InterPro; IPR006171; TOPRIM_domain.
DR   InterPro; IPR034141; TOPRIM_RNase_M5-like.
DR   InterPro; IPR022972; UPF0292.
DR   Pfam; PF01751; Toprim; 1.
DR   SMART; SM00493; TOPRIM; 1.
DR   PROSITE; PS50880; TOPRIM; 1.
PE   3: Inferred from homology;
KW   Magnesium; Metal-binding; Reference proteome.
FT   CHAIN           1..133
FT                   /note="UPF0292 protein TK1411"
FT                   /id="PRO_0000143957"
FT   DOMAIN          20..100
FT                   /note="Toprim"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT   BINDING         26
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT   BINDING         69
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT   BINDING         69
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT   BINDING         71
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
SQ   SEQUENCE   133 AA;  15293 MW;  29D88E2FF510BA1C CRC64;
     MYPENYKRFL ELIDKLREFE GALIVEGLRD EVALRNLGVR AEIIRLSRLP LSEVALIASS
     HKEVMILTDF DKKGEELAKK LLNYLAGYPC SVDIETWKEL RKLVRKDIKG VEDLYGLYLR
     VVSVSDPLLE GIQ