CAPSD_HASV
ID CAPSD_HASV Reviewed; 647 AA.
AC Q82462;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 29-SEP-2021, entry version 63.
DE RecName: Full=Capsid protein;
DE Short=CP;
DE AltName: Full=Coat protein;
DE Contains:
DE RecName: Full=64 kDa capsid protein;
DE Contains:
DE RecName: Full=7 kDa capsid protein;
GN Name=p71;
OS Helicoverpa armigera stunt virus (HaSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Hepelivirales; Alphatetraviridae; Omegatetravirus.
OX NCBI_TaxID=37206;
OH NCBI_TaxID=29058; Helicoverpa armigera (Cotton bollworm) (Heliothis armigera).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=9049325; DOI=10.1099/0022-1317-76-4-799;
RA Hanzlik T.N., Dorrian S.J., Johnson K.N., Brooks E.M., Gordon K.H.;
RT "Sequence of RNA2 of the Helicoverpa armigera stunt virus (Tetraviridae)
RT and bacterial expression of its genes.";
RL J. Gen. Virol. 76:799-811(1995).
RN [2]
RP PROTEIN SEQUENCE OF 255-274 AND 576-596.
RX PubMed=8376959; DOI=10.1099/0022-1317-74-9-1805;
RA Hanzlik T.N., Dorrian S.J., Gordon K.H., Christian P.D.;
RT "A novel small RNA virus isolated from the cotton bollworm, Helicoverpa
RT armigera.";
RL J. Gen. Virol. 74:1805-1810(1993).
CC -!- FUNCTION: Self-assembles to form an icosahedral capsid with a T=4
CC symmetry, about 35 nm in diameter, and consisting of 240 copies of the
CC two structural proteins. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the tetravirus capsid protein family.
CC {ECO:0000305}.
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DR EMBL; L37299; AAC37885.1; -; Genomic_RNA.
DR RefSeq; NP_049237.1; NC_001982.1.
DR PDB; 3S6P; X-ray; 2.50 A; A/B/C/D=1-575, E/F/G/H=576-647.
DR PDBsum; 3S6P; -.
DR SMR; Q82462; -.
DR MEROPS; N02.001; -.
DR GeneID; 991182; -.
DR KEGG; vg:991182; -.
DR Proteomes; UP000006711; Genome.
DR GO; GO:0039619; C:T=4 icosahedral viral capsid; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.20; -; 2.
DR InterPro; IPR005313; Peptidase_N2.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF03566; Peptidase_A21; 1.
DR PIRSF; PIRSF007212; Peptidase_A21; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Direct protein sequencing;
KW Reference proteome; T=4 icosahedral capsid protein; Virion.
FT CHAIN 1..575
FT /note="64 kDa capsid protein"
FT /id="PRO_0000402488"
FT CHAIN 576..647
FT /note="7 kDa capsid protein"
FT /id="PRO_0000402489"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..33
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 575..576
FT /note="Cleavage"
FT /evidence="ECO:0000255"
FT HELIX 51..58
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 62..64
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 65..67
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 69..71
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 75..82
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 89..99
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 101..106
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 123..136
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 152..159
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 162..172
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 180..191
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 196..202
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 209..211
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 214..220
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 222..225
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 231..234
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 239..253
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 256..258
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 262..268
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 273..278
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 280..284
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 289..293
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 295..298
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 300..309
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 321..323
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 325..333
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 343..346
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 352..357
FT /evidence="ECO:0007829|PDB:3S6P"
FT TURN 358..361
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 362..368
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 372..377
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 379..388
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 390..393
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 397..401
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 406..411
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 413..415
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 417..420
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 425..430
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 436..442
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 447..450
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 451..454
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 455..460
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 465..468
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 472..474
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 477..483
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 489..491
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 494..496
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 505..507
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 509..518
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 522..534
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 542..544
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 553..565
FT /evidence="ECO:0007829|PDB:3S6P"
FT STRAND 568..571
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 572..574
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 579..607
FT /evidence="ECO:0007829|PDB:3S6P"
FT HELIX 632..646
FT /evidence="ECO:0007829|PDB:3S6P"
SQ SEQUENCE 647 AA; 70670 MW; 0B205B8CB53CFBD2 CRC64;
MGDAGVASQR PHNRRGTRNV RVSANTVTVN GRRNQRRRTG RQVSPPDNFT AAAQDLAQSL
DANTVTFPAN ISSMPEFRNW AKGKIDLDSD SIGWYFKYLD PAGATESARA VGEYSKIPDG
LVKFSVDAEI REIYNEECPV VTDVSVPLDG RQWSLSIFSF PMFRTAYVAV ANVENKEMSL
DVVNDLIEWL NNLADWRYVV DSEQWINFTN DTTYYVRIRV LRPTYDVPDP TEGLVRTVSD
YRLTYKAITC EANMPTLVDQ GFWIGGQYAL TPTSLPQYDV SEAYALHTLT FARPSSAAAL
AFVWAGLPQG GTAPAGTPAW EQASSGGYLT WRHNGTTFPA GSVSYVLPEG FALERYDPND
GSWTDFASAG DTVTFRQVAV DEVVVTNNPA GGGSAPTFTV RVPPSNAYTN TVFRNTLLET
RPSSRRLELP MPPADFGQTV ANNPKIEQSL LKETLGCYLV HSKMRNPVFQ LTPASSFGAV
SFNNPGYERT RDLPDYTGIR DSFDQNMSTA VAHFRSLSHS CSIVTKTYQG WEGVTNVNTP
FGQFAHAGLL KNEEILCLAD DLATRLTGVY PATDNFAAAV SAFAANMLSS VLKSEATSSI
IKSVGETAVG AAQSGLAKLP GLLMSVPGKI AARVRARRAR RRAARAN
