Y1465_ARATH
ID Y1465_ARATH Reviewed; 214 AA.
AC Q6DST1; Q9SH57;
DT 24-JUN-2015, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};
GN OrderedLocusNames=At1g64065 {ECO:0000312|Araport:AT1G64065};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA / MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane
CC protein {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the LEA type 2 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF24575.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g64065 and At1g64070.; Evidence={ECO:0000305};
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DR EMBL; AC007764; AAF24575.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34187.1; -; Genomic_DNA.
DR EMBL; AY648317; AAT68728.1; -; mRNA.
DR EMBL; AY773828; AAV63857.1; -; Genomic_DNA.
DR RefSeq; NP_974086.1; NM_202357.3.
DR AlphaFoldDB; Q6DST1; -.
DR SMR; Q6DST1; -.
DR STRING; 3702.AT1G64065.1; -.
DR PaxDb; Q6DST1; -.
DR PRIDE; Q6DST1; -.
DR ProteomicsDB; 243051; -.
DR EnsemblPlants; AT1G64065.1; AT1G64065.1; AT1G64065.
DR GeneID; 2745848; -.
DR Gramene; AT1G64065.1; AT1G64065.1; AT1G64065.
DR KEGG; ath:AT1G64065; -.
DR Araport; AT1G64065; -.
DR TAIR; locus:1006230721; AT1G64065.
DR eggNOG; ENOG502S144; Eukaryota.
DR HOGENOM; CLU_050605_2_0_1; -.
DR InParanoid; Q6DST1; -.
DR OMA; SVMSCTM; -.
DR OrthoDB; 1263687at2759; -.
DR PhylomeDB; Q6DST1; -.
DR PRO; PR:Q6DST1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q6DST1; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR004864; LEA_2.
DR Pfam; PF03168; LEA_2; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..214
FT /note="Late embryogenesis abundant protein At1g64065"
FT /id="PRO_0000433385"
FT TRANSMEM 41..61
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 214 AA; 24282 MW; 4494E9ECE8C1DAF5 CRC64;
MVDEDRITLA PTEIYGRSDE EQSGPRIWRR KTEEPPGKCL VYSLTIIVII FALCLILSSI
FLRISKPEIE TRSISTRDLR SGGNSTNPYF NATLVSDISI RNSNFGAFEF EDSTLRVVYA
DHGVVGETKI EGRRVEAHKT VRITGVVVEI GSFRLLDTKD LDKDLRLGFL ELRSVAEVRG
RIKVLGRKRW KVSVMSCTMR LNLTGRFIQN LLCE