ID   Y1526_METAR             Reviewed;         324 AA.
AC   Q0W4J4;
DT   20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-SEP-2006, sequence version 1.
DT   25-MAY-2022, entry version 86.
DE   RecName: Full=Putative HTH-type transcriptional regulatory protein UNCMA_15260 {ECO:0000255|HAMAP-Rule:MF_00584};
GN   OrderedLocusNames=UNCMA_15260; ORFNames=RCIX1430;
OS   Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=351160;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 22066 / NBRC 105507 / MRE50;
RX   PubMed=16857943; DOI=10.1126/science.1127062;
RA   Erkel C., Kube M., Reinhardt R., Liesack W.;
RT   "Genome of rice cluster I archaea -- the key methane producers in the rice
RT   rhizosphere.";
RL   Science 313:370-372(2006).
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DR   EMBL; AM114193; CAJ36699.1; -; Genomic_DNA.
DR   RefSeq; WP_012035852.1; NC_009464.1.
DR   AlphaFoldDB; Q0W4J4; -.
DR   SMR; Q0W4J4; -.
DR   STRING; 351160.RCIX1430; -.
DR   EnsemblBacteria; CAJ36699; CAJ36699; RCIX1430.
DR   GeneID; 5145103; -.
DR   KEGG; rci:RCIX1430; -.
DR   eggNOG; arCOG04152; Archaea.
DR   OMA; PGVVYFR; -.
DR   OrthoDB; 76134at2157; -.
DR   Proteomes; UP000000663; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; -; 1.
DR   HAMAP; MF_00584; HTH_type_cro_C1; 1.
DR   InterPro; IPR020886; Arc_TR_HTH.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..324
FT                   /note="Putative HTH-type transcriptional regulatory protein
FT                   UNCMA_15260"
FT                   /id="PRO_1000082413"
FT   DOMAIN          132..189
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
FT   DNA_BIND        143..162
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
SQ   SEQUENCE   324 AA;  35833 MW;  EF8DCF3D01E4347E CRC64;
     MTRETLLDRV IALLWKAEFT LSEKCDIRPR SFDVAARRGK TLLLVKVLSN IEGMSEETSQ
     EMRRLSVLFN GSPIVIGEHT NDHPLEIGAV YLRYGIPCVN IETLHDFFIE EVPPLVYAAP
     GGLYVEIDGE TLRSLREAKN ISLGELAMAL GVSRRTISKY ESGMNATIEA ALKLEEILDA
     PIACPVNMIV MFERTAKDAD PSPNDLRNAS ALEKEALGTL MHIGFEVFHT TKAPFNALSQ
     DDAAKMITGV SDYNEAMLKK AKFMSSLADV AGTYSLFIVK GPHRPKAVGN TLLIKSEELK
     QFDDRSDLFD LLLSREVKKA NAGK