CAPSD_HEVME
ID CAPSD_HEVME Reviewed; 659 AA.
AC Q03500;
DT 01-OCT-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1993, sequence version 1.
DT 29-SEP-2021, entry version 67.
DE RecName: Full=Capsid protein;
DE AltName: Full=Protein ORF2;
DE Short=pORF2;
DE Flags: Precursor;
GN ORFNames=ORF2;
OS Hepatitis E virus genotype 2 (isolate Human/Mexico) (HEV-2).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Hepelivirales; Hepeviridae; Orthohepevirus; Hepatitis E virus.
OX NCBI_TaxID=31768;
OH NCBI_TaxID=69079; Bandicota bengalensis (lesser bandicoot rat).
OH NCBI_TaxID=9481; Callithrix.
OH NCBI_TaxID=9536; Cercopithecus hamlyni (Owl-faced monkey) (Hamlyn's monkey).
OH NCBI_TaxID=9534; Chlorocebus aethiops (Green monkey) (Cercopithecus aethiops).
OH NCBI_TaxID=9031; Gallus gallus (Chicken).
OH NCBI_TaxID=9606; Homo sapiens (Human).
OH NCBI_TaxID=9539; Macaca (macaques).
OH NCBI_TaxID=10090; Mus musculus (Mouse).
OH NCBI_TaxID=9598; Pan troglodytes (Chimpanzee).
OH NCBI_TaxID=9520; Saimiri (squirrel monkeys).
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1448913; DOI=10.1016/0042-6822(92)90230-m;
RA Huang C.C., Nguyen D., Fernandez J., Yun K.Y., Fry K.E., Bradley D.W.,
RA Tam A.W., Reyes G.R.;
RT "Molecular cloning and sequencing of the Mexico isolate of hepatitis E
RT virus (HEV).";
RL Virology 191:550-558(1992).
CC -!- FUNCTION: Major viral capsid protein that encapsidates the viral
CC genome. Binds to the 5' end of the genomic RNA (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homodimers. Homooligomer. Self-assembles to form the capsid.
CC The capsid is dominated by dimers that define the 30 morphological
CC units. The unglycosylated form interacts with the phosphorylated ORF3
CC protein (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm
CC {ECO:0000250}. Host cell surface {ECO:0000250}. Note=Initially
CC cotranslationally translocated into the ER from where it is
CC retrotranslocated to the cytoplasm. A fraction is also observed on the
CC cell surface (By similarity). {ECO:0000250}.
CC -!- PTM: Glycosylated when overexpressed in mammalian cells. In vivo, the
CC glycosylated form is probably much less stable than the non-
CC glycosylated form, which is present in the cytosol and represents the
CC major product accumulated in the cell. May be present initially as a
CC glycosylated protein in the ER, and may become unglycosylated and
CC retrotranslocated to the cytoplasm by the endoplasmic reticulum-
CC associated degradation (ERAD) system. The non-glycosylated form may
CC therefore be the authentic intermediate in HEV capsid assembly (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the hepevirus capsid protein family.
CC {ECO:0000305}.
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DR EMBL; M74506; AAA45732.1; -; Genomic_RNA.
DR PIR; B44212; B44212.
DR SMR; Q03500; -.
DR Proteomes; UP000007245; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0044228; C:host cell surface; IEA:UniProtKB-SubCell.
DR GO; GO:0039615; C:T=1 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR004261; SP2.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF03014; SP2; 2.
PE 3: Inferred from homology;
KW Capsid protein; Host cytoplasm; RNA-binding; Signal;
KW T=1 icosahedral capsid protein; Virion.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..659
FT /note="Capsid protein"
FT /id="PRO_0000036996"
FT REGION 19..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 64..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 367..393
FT /note="particle formation"
FT /evidence="ECO:0000250"
FT REGION 584..609
FT /note="Oligomerization"
FT /evidence="ECO:0000250"
SQ SEQUENCE 659 AA; 70641 MW; CF75E75EFD8FBE2C CRC64;
MRPRPLLLLF LLFLPMLPAP PTGQPSGRRR GRRSGGTGGG FWGDRVDSQP FAIPYIHPTN
PFAPDVAAAS GSGPRLRQPA RPLGSTWRDQ AQRPSAASRR RPATAGAAAL TAVAPAHDTS
PVPDVDSRGA ILRRQYNLST SPLTSSVASG TNLVLYAAPL NPPLPLQDGT NTHIMATEAS
NYAQYRVARA TIRYRPLVPN AVGGYAISIS FWPQTTTTPT SVDMNSITST DVRILVQPGI
ASELVIPSER LHYRNQGWRS VETSGVAEEE ATSGLVMLCI HGSPVNSYTN TPYTGALGLL
DFALELEFRN LTTCNTNTRV SRYSSTARHS ARGADGTAEL TTTAATRFMK DLHFTGLNGV
GEVGRGIALT LLNLADTLLG GLPTELISSA GGQLFYSRPV VSANGEPTVK LYTSVENAQQ
DKGVAIPHDI DLGDSRVVIQ DYDNQHEQDR PTPSPAPSRP FSVLRANDVL WLSLTAAEYD
QSTYGSSTGP VYISDSVTLV NVATGAQAVA RSLDWSKVTL DGRPLPTVEQ YSKTFFVLPL
RGKLSFWEAG TTKAGYPYNY NTTASDQILI ENAAGHRVAI STYTTRLGAG PVAISAAAVL
APRSALALLE DTFDYPGRAH TFDDFCPECR ALGLQGCAFQ STVAELQRLK VKVGKTREL