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Y152_RHOPA
ID   Y152_RHOPA              Reviewed;         167 AA.
AC   Q6NDF6;
DT   03-APR-2013, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 85.
DE   RecName: Full=S-adenosyl-L-methionine-binding protein RPA0152;
GN   OrderedLocusNames=RPA0152;
OS   Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=258594;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-98 / CGA009;
RX   PubMed=14704707; DOI=10.1038/nbt923;
RA   Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA   Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA   Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA   Harrison F.H., Gibson J., Harwood C.S.;
RT   "Complete genome sequence of the metabolically versatile photosynthetic
RT   bacterium Rhodopseudomonas palustris.";
RL   Nat. Biotechnol. 22:55-61(2004).
RN   [2]
RP   X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH
RP   S-ADENOSYL-L-METHIONINE, AND SUBUNIT.
RA   Chang C., Evdokimova E., Liu F., Savchenko A., Edwards A., Joachimiak A.;
RT   "Crystal structure of YaeB-like protein from Rhodopseudomonas palustris.";
RL   Submitted (AUG-2010) to the PDB data bank.
CC   -!- SUBUNIT: Homodimer. {ECO:0000305|Ref.2}.
CC   -!- SIMILARITY: Belongs to the tRNA methyltransferase O family.
CC       {ECO:0000305}.
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DR   EMBL; BX572593; CAE25596.1; -; Genomic_DNA.
DR   RefSeq; WP_011155720.1; NC_005296.1.
DR   PDB; 3OKX; X-ray; 1.80 A; A/B=1-167.
DR   PDBsum; 3OKX; -.
DR   AlphaFoldDB; Q6NDF6; -.
DR   SMR; Q6NDF6; -.
DR   STRING; 258594.RPA0152; -.
DR   PRIDE; Q6NDF6; -.
DR   EnsemblBacteria; CAE25596; CAE25596; RPA0152.
DR   GeneID; 66891154; -.
DR   KEGG; rpa:RPA0152; -.
DR   eggNOG; COG1720; Bacteria.
DR   HOGENOM; CLU_013458_2_0_5; -.
DR   OMA; FYWLHRS; -.
DR   PhylomeDB; Q6NDF6; -.
DR   BioCyc; RPAL258594:TX73_RS00775-MON; -.
DR   EvolutionaryTrace; Q6NDF6; -.
DR   Proteomes; UP000001426; Chromosome.
DR   CDD; cd09281; UPF0066; 1.
DR   Gene3D; 2.40.30.70; -; 1.
DR   InterPro; IPR023370; TrmO-like_N.
DR   InterPro; IPR040372; YaeB-like.
DR   InterPro; IPR036413; YaeB-like_sf.
DR   InterPro; IPR036414; YaeB_N_sf.
DR   PANTHER; PTHR12818; PTHR12818; 1.
DR   Pfam; PF01980; TrmO; 1.
DR   SUPFAM; SSF118196; SSF118196; 1.
DR   PROSITE; PS51668; TSAA_2; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Reference proteome; S-adenosyl-L-methionine.
FT   CHAIN           1..167
FT                   /note="S-adenosyl-L-methionine-binding protein RPA0152"
FT                   /id="PRO_0000421924"
FT   DOMAIN          24..154
FT                   /note="TsaA-like"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01003"
FT   REGION          148..167
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         41..43
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000269|Ref.2"
FT   BINDING         79..80
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000269|Ref.2"
FT   BINDING         103
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000269|Ref.2"
FT   BINDING         113
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000269|Ref.2"
FT   BINDING         132..137
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000269|Ref.2"
FT   STRAND          21..24
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          28..31
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   HELIX           37..39
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          51..55
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   HELIX           57..63
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          71..77
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          85..88
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   HELIX           99..101
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          107..109
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          111..122
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          125..129
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   STRAND          137..144
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   HELIX           146..148
FT                   /evidence="ECO:0007829|PDB:3OKX"
FT   HELIX           157..160
FT                   /evidence="ECO:0007829|PDB:3OKX"
SQ   SEQUENCE   167 AA;  18611 MW;  4FC18E1F8737287C CRC64;
     MDATDDIRAG ELASDWSGSP DAGVVFIGRI HTPWNRLKEC PRHGRADGPV CRIEVFETWL
     PALAGIDDGT LLEVFYWLHR SRRDLLLQCP RNDGDARGTF SIRSPLRPNP IGTSIARVDR
     RDGANLFIRG LDCLDGTPLV DLKPDRAEFM PLAPPKPGDF QVGEPRR
 
 
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