ID   CAPSD_LIYV9             Reviewed;         249 AA.
AC   Q83049;
DT   30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1996, sequence version 1.
DT   02-JUN-2021, entry version 52.
DE   RecName: Full=Capsid protein;
DE            Short=CP;
DE   AltName: Full=Coat protein;
OS   Lettuce infectious yellows virus (isolate United States/92) (LIYV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Martellivirales; Closteroviridae; Crinivirus.
OX   NCBI_TaxID=651355;
OH   NCBI_TaxID=161934; Beta vulgaris (Sugar beet).
OH   NCBI_TaxID=3654; Citrullus lanatus (Watermelon) (Citrullus vulgaris).
OH   NCBI_TaxID=3656; Cucumis melo (Muskmelon).
OH   NCBI_TaxID=3661; Cucurbita maxima (Pumpkin) (Winter squash).
OH   NCBI_TaxID=3662; Cucurbita moschata (Winter crookneck squash) (Cucurbita pepo var. moschata).
OH   NCBI_TaxID=3663; Cucurbita pepo (Vegetable marrow) (Summer squash).
OH   NCBI_TaxID=4039; Daucus carota (Wild carrot).
OH   NCBI_TaxID=4236; Lactuca sativa (Garden lettuce).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=11831736; DOI=10.1006/viro.1995.1133;
RA   Klaassen V.A., Boeshore M.L., Koonin E.V., Tian T., Falk B.W.;
RT   "Genome structure and phylogenetic analysis of lettuce infectious yellows
RT   virus, a whitefly-transmitted, bipartite closterovirus.";
RL   Virology 208:99-110(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=8021583; DOI=10.1099/0022-1317-75-7-1525;
RA   Klaassen V.A., Boeshore M., Dolja V.V., Falk B.W.;
RT   "Partial characterization of the lettuce infectious yellows virus genomic
RT   RNAs, identification of the coat protein gene and comparison of its amino
RT   acid sequence with those of other filamentous RNA plant viruses.";
RL   J. Gen. Virol. 75:1525-1533(1994).
RN   [3]
RP   SUBCELLULAR LOCATION.
RX   PubMed=10355756; DOI=10.1099/0022-1317-80-5-1111;
RA   Tian T., Rubio L., Yeh H.H., Crawford B., Falk B.W.;
RT   "Lettuce infectious yellows virus: in vitro acquisition analysis using
RT   partially purified virions and the whitefly Bemisia tabaci.";
RL   J. Gen. Virol. 80:1111-1117(1999).
CC   -!- FUNCTION: Capsid protein self-assembles to form filamentous capsids,
CC       about 650-850 nm in length. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:10355756}.
CC   -!- SIMILARITY: Belongs to the closteroviridae capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; U15441; AAA61802.1; -; Genomic_RNA.
DR   RefSeq; NP_619697.1; NC_003618.1.
DR   GeneID; 991077; -.
DR   KEGG; vg:991077; -.
DR   Proteomes; UP000001099; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   InterPro; IPR002679; Closter_coat.
DR   Pfam; PF01785; Closter_coat; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Helical capsid protein; Reference proteome; Virion.
FT   CHAIN           1..249
FT                   /note="Capsid protein"
FT                   /id="PRO_0000402517"
FT   REGION          1..33
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        15..30
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   249 AA;  27770 MW;  93E25CB2F1CAB6ED CRC64;
     MDTDGDNDVF GSGNDTRNND DKKKEEMKQN ISDNSQIIST RDHEADIIGS ISKEDLSKIV
     VRVDRHDALS ANDVQSFREA MINFMRDKDP NRNQPSDKLI IAMEVGVYQM VINLGTSAKL
     GNANNLEFTI AYDQETRTYK VADFVNYMQS RMRNSPNVVR QYARAMEKTI NNIRSAGIIN
     SNGVLAAKHG VLASYRNSYS DFAVGFGNDT TDAQLTSLML ARKQALCKGE GGSVEHYNTM
     QLANLKHPC