CAPSD_MEVA
ID CAPSD_MEVA Reviewed; 722 AA.
AC P27437;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 2.
DT 23-FEB-2022, entry version 78.
DE RecName: Full=Capsid protein VP1;
DE AltName: Full=Coat protein VP1;
DE Contains:
DE RecName: Full=Capsid protein VP2;
DE AltName: Full=Coat protein VP2;
OS Mink enteritis virus (strain Abashiri) (MEV).
OC Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes;
OC Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus.
OX NCBI_TaxID=10793;
OH NCBI_TaxID=452646; Neovison vison (American mink) (Mustela vison).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2016597; DOI=10.1099/0022-1317-72-4-867;
RA Kariatsumari T., Horiuchi M., Hama E., Yaguchi K., Ishigurio N., Goto H.,
RA Shinagawa M.;
RT "Construction and nucleotide sequence analysis of an infectious DNA clone
RT of the autonomous parvovirus, mink enteritis virus.";
RL J. Gen. Virol. 72:867-875(1991).
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=1 symmetry, about 22 nm in diameter, and consisting of 60
CC copies of two size variants of the capsid proteins, VP1 and VP2, which
CC differ by the presence of an N-terminal extension in the minor protein
CC VP1. The capsid encapsulates the genomic ssDNA. Capsid proteins are
CC responsible for the attachment to host cell receptors. This attachment
CC induces virion internalization predominantly through clathrin-dependent
CC endocytosis. Binding to the host receptors also induces capsid
CC rearrangements leading to surface exposure of VP1 N-terminus,
CC specifically its phospholipase A2-like region and putative nuclear
CC localization signal(s). VP1 N-terminus might serve as a lipolytic
CC enzyme to breach the endosomal membrane during entry into host cell and
CC might contribute to virus transport to the nucleus (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: [Capsid protein VP1]: Virion {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: [Capsid protein VP2]: Virion {ECO:0000305}.
CC -!- DOMAIN: The N-terminus of VP1 is sequestered within the mature capsid.
CC It contains a phospholipase A2-like region and putative nuclear
CC localization signals.
CC -!- SIMILARITY: Belongs to the parvoviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; D00765; BAA00663.1; -; Genomic_DNA.
DR PIR; B38350; VCPVME.
DR SMR; P27437; -.
DR Proteomes; UP000007717; Genome.
DR GO; GO:0039615; C:T=1 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0075512; P:clathrin-dependent endocytosis of virus by host cell; IEA:UniProtKB-KW.
DR GO; GO:0039665; P:permeabilization of host organelle membrane involved in viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0099008; P:viral entry via permeabilization of inner membrane; IEA:UniProtKB-KW.
DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
DR Gene3D; 2.170.30.10; -; 1.
DR InterPro; IPR016184; Capsid/spike_ssDNA_virus.
DR InterPro; IPR001403; Parvovirus_coat.
DR InterPro; IPR013607; Phospholipase_A2-like.
DR InterPro; IPR036952; VP1/VP2.
DR Pfam; PF00740; Parvo_coat; 1.
DR Pfam; PF08398; Phospholip_A2_4; 1.
DR SUPFAM; SSF88645; SSF88645; 1.
PE 3: Inferred from homology;
KW Capsid protein; Clathrin-mediated endocytosis of virus by host;
KW Host-virus interaction; T=1 icosahedral capsid protein;
KW Viral attachment to host cell; Viral penetration into host cytoplasm;
KW Viral penetration via permeabilization of host membrane; Virion;
KW Virus endocytosis by host; Virus entry into host cell.
FT CHAIN 1..722
FT /note="Capsid protein VP1"
FT /id="PRO_0000039415"
FT CHAIN 139..722
FT /note="Capsid protein VP2"
FT /id="PRO_0000039416"
FT REGION 14..59
FT /note="Phospholipase A2-like"
FT /evidence="ECO:0000250"
FT REGION 90..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 136..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 497..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 722 AA; 79823 MW; 9DADBCAB2EF9F622 CRC64;
MCFFIGLVPP GYKYLGPGNS LDQGEPTNPS DAAAKEHDEA YAAYLRSGKN PYLYFSPADQ
RFIDQTKDAT DWGGKIGHYF FRAKKAIAPV LTDTPDHPST SRPTKPTKRS KPPPHIFINL
AKKKKAGAGQ VKRDNLAPMS DGAVQPDGGQ PAVRNERATG SGNGSGGGGG GGSGGVGIST
GTFNNQTEFK FLENGWVEIT ANSSRLVHLN MPESENYKRV VVNNMDKTAV KGNMALDDTH
VQIVTPWSLV DANAWGVWFN PGDWQLIVNT MSELHLVSFE QEIFNVVLKT VSESATQPPT
KVYNNDLTAS LMVALDSNNT MPFTPAAMRS ETLGFYPWKP TIPTPWRYYF QWDRTLIPSH
TGTSGTPTNI YHGTDPDDVQ FYTIENSVPV HLLRTGDEFA TGTFFFDCKP CRLTHTWQTN
RALGLPPFLN SLPQSEGATN FGDIGVQQDK RRGVTQMGNT DYITEATIMR PAEVGYSAPY
YSFEASTQGP FKTPIAAGRG GAQTDENQAA DGDPRYAFGR QHGQKTTTTG ETPERFTYIA
HQDTGRYPAG DWIQNINFNL PVTNDNVLLP TDPIGGKTGI NYTNIFNTYG PLTALNNVPP
VYPNGQIWDK EFDTDLKPRL HVNAPFVCQN NCPGQLFVKV APNLTNEYDP DASANMSRIV
TYSDFWWKGK LVFKAKLRAS HTWNPIQQMS INVDNQFNYL PNNIGAMKIV YEKSQLAPRK
LY