Y1583_ARATH
ID Y1583_ARATH Reviewed; 127 AA.
AC A8MS78; Q8RXL4; Q9MA43;
DT 01-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 04-DEC-2007, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=Uncharacterized protein At1g05835;
DE Flags: Precursor;
GN OrderedLocusNames=At1g05835; ORFNames=T20M3.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Alexandrov N.N., Brover V.V., Troukhan M.E., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF29390.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g05830 and At1g05835.; Evidence={ECO:0000305};
CC Sequence=AAL87299.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AC009999; AAF29390.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27902.1; -; Genomic_DNA.
DR EMBL; AY080821; AAL87299.1; ALT_INIT; mRNA.
DR EMBL; DQ108722; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; A86193; A86193.
DR RefSeq; NP_001077465.1; NM_001083996.3.
DR AlphaFoldDB; A8MS78; -.
DR STRING; 3702.AT1G05835.1; -.
DR PaxDb; A8MS78; -.
DR PRIDE; A8MS78; -.
DR ProteomicsDB; 242392; -.
DR EnsemblPlants; AT1G05835.1; AT1G05835.1; AT1G05835.
DR GeneID; 5007665; -.
DR Gramene; AT1G05835.1; AT1G05835.1; AT1G05835.
DR KEGG; ath:AT1G05835; -.
DR Araport; AT1G05835; -.
DR TAIR; locus:4010713414; AT1G05835.
DR eggNOG; KOG1080; Eukaryota.
DR HOGENOM; CLU_102808_2_0_1; -.
DR OMA; NNCPMCP; -.
DR OrthoDB; 1492255at2759; -.
DR PhylomeDB; A8MS78; -.
DR PRO; PR:A8MS78; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A8MS78; baseline and differential.
DR GO; GO:0001709; P:cell fate determination; IBA:GO_Central.
DR InterPro; IPR040361; TPD1.
DR PANTHER; PTHR33184; PTHR33184; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..127
FT /note="Uncharacterized protein At1g05835"
FT /id="PRO_0000381975"
FT CONFLICT 14
FT /note="A -> D (in Ref. 4; AAL87299)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 127 AA; 14221 MW; 36B24F9D64A585CA CRC64;
MSKPLKFLLW SSLALLLLQI GSGAICEGKS SEPAVRQTQV KWREGKKFRV EVMNKCPMCP
IINLRLKCQG FPQSLVDPTF LRVLSSSAGN CVVNDGLPLS PMQTLSFNYS NTHQFALRPL
SWSFQCE
