Y1592_ARATH
ID Y1592_ARATH Reviewed; 315 AA.
AC Q5RM09; Q9MA33;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=B3 domain-containing protein At1g05920;
GN OrderedLocusNames=At1g05920; ORFNames=T20M3.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA / MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF29399.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009999; AAF29399.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27918.1; -; Genomic_DNA.
DR EMBL; AY800566; AAV68802.1; -; mRNA.
DR EMBL; AY803489; AAV66313.1; -; Genomic_DNA.
DR EMBL; AB493436; BAH30274.1; -; Genomic_DNA.
DR PIR; C86194; C86194.
DR RefSeq; NP_172083.1; NM_100473.2.
DR AlphaFoldDB; Q5RM09; -.
DR PaxDb; Q5RM09; -.
DR PRIDE; Q5RM09; -.
DR EnsemblPlants; AT1G05920.1; AT1G05920.1; AT1G05920.
DR GeneID; 837102; -.
DR Gramene; AT1G05920.1; AT1G05920.1; AT1G05920.
DR KEGG; ath:AT1G05920; -.
DR Araport; AT1G05920; -.
DR TAIR; locus:2198758; AT1G05920.
DR eggNOG; ENOG502S4WY; Eukaryota.
DR HOGENOM; CLU_883822_0_0_1; -.
DR InParanoid; Q5RM09; -.
DR OMA; ICKRREE; -.
DR OrthoDB; 1315199at2759; -.
DR PhylomeDB; Q5RM09; -.
DR PRO; PR:Q5RM09; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q5RM09; baseline and differential.
DR Genevisible; Q5RM09; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..315
FT /note="B3 domain-containing protein At1g05920"
FT /id="PRO_0000375125"
FT DNA_BIND 204..306
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 24..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 315 AA; 36477 MW; 435F16B0EE98BC69 CRC64;
MSSRDKPKTF AEVREEICKR REEMISRDNQ KKTKTVAQVR EEKGKRREEM ISRYNQKKAK
TVAQVKEGKG KRREEMISRD NRTKPKTVAQ VRDAKRKRTF DHVPRGTREP HAYLRNDPAP
QVASVPKSVP EEKDVILDRI LSNVPRRKKT TSYEFVPPKH PQEPQWLLQV MSRMNGAGDP
KLIIEKNLDS NDVDPRQNRL SIPINTVIQN DFLTLDESRL IDEDEITNEG NMGVAAFLVD
QRTKKWNMGF KQWFMTTDSG SSYWSFVLRG EWSNVVETNG LKEGDKISLW SFRSNDILCF
ALVPPTSSVV ESLDK
