Y1593_ARATH
ID Y1593_ARATH Reviewed; 318 AA.
AC Q9MA32;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 2.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=B3 domain-containing protein At1g05930;
GN OrderedLocusNames=At1g05930; ORFNames=T20M3.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF29400.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009999; AAF29400.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27920.1; -; Genomic_DNA.
DR PIR; D86194; D86194.
DR RefSeq; NP_172084.2; NM_100474.2.
DR AlphaFoldDB; Q9MA32; -.
DR PaxDb; Q9MA32; -.
DR PRIDE; Q9MA32; -.
DR EnsemblPlants; AT1G05930.1; AT1G05930.1; AT1G05930.
DR GeneID; 837103; -.
DR Gramene; AT1G05930.1; AT1G05930.1; AT1G05930.
DR KEGG; ath:AT1G05930; -.
DR Araport; AT1G05930; -.
DR TAIR; locus:2198763; AT1G05930.
DR HOGENOM; CLU_072178_0_0_1; -.
DR InParanoid; Q9MA32; -.
DR OMA; NFENPNG; -.
DR OrthoDB; 741298at2759; -.
DR PhylomeDB; Q9MA32; -.
DR PRO; PR:Q9MA32; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9MA32; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..318
FT /note="B3 domain-containing protein At1g05930"
FT /id="PRO_0000375126"
FT DNA_BIND 201..293
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
SQ SEQUENCE 318 AA; 37356 MW; 96F200CC16E621E8 CRC64;
MTTNDDDHAA ERNTMSMNYE LAATLSDEEQ RARKGKAKIV CKEEDHVFIK KKEKYEEESE
KREFFSHVPR KIRPALRYPQ PNFENPNGAS SSLNLPFEED YYMAEYYKKT ETINPPNPYH
QWSPSSFLTE YTHPRMLEVL HRCGFNRPVV TCYSRTAREM RWWLRQVMKD MRAEDLTLIL
EKTLSTTDVI TTTHGRFSMH FNRLISNDFL KPEERSILEE DTYNDETMGV GAILVDQRSQ
KWSVILKRWG QNYFLSCGWN DVVKANKLKA GDDICLWAFR CDGVLCFAMR QWRGILCFAL
VPPLTLRQSS SSNARRLC