CAPSD_NMV
ID CAPSD_NMV Reviewed; 240 AA.
AC P15100;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 1.
DT 23-FEB-2022, entry version 81.
DE RecName: Full=Coat protein;
DE AltName: Full=Capsid protein;
DE Short=CP;
OS Narcissus mosaic virus (NMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Tymovirales; Alphaflexiviridae; Potexvirus.
OX NCBI_TaxID=12180;
OH NCBI_TaxID=39639; Narcissus pseudonarcissus (Daffodil).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2732689; DOI=10.1099/0022-1317-70-2-267;
RA Zuidema D., Linthorst H.J.M., Huisman M.J., Asjes C.J., Bol J.F.;
RT "Nucleotide sequence of narcissus mosaic virus RNA.";
RL J. Gen. Virol. 70:267-276(1989).
RN [2]
RP REVIEW.
RX PubMed=15828680; DOI=10.1094/mpmi-18-0283;
RA Verchot-Lubicz J.;
RT "A new cell-to-cell transport model for Potexviruses.";
RL Mol. Plant Microbe Interact. 18:283-290(2005).
CC -!- FUNCTION: Required for genome encapsidation. Forms ribonucleoprotein
CC complexes along with TGB1 helicase and viral RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the potexvirus capsid protein family.
CC {ECO:0000305}.
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DR EMBL; D13747; BAA02895.1; -; Genomic_RNA.
DR PIR; JT0474; VCWGN4.
DR RefSeq; NP_040782.1; NC_001441.1.
DR SMR; P15100; -.
DR GeneID; 1494019; -.
DR KEGG; vg:1494019; -.
DR Proteomes; UP000008865; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR000052; Pltvir_coat.
DR Pfam; PF00286; Flexi_CP; 1.
DR PRINTS; PR00232; POTXCARLCOAT.
DR PROSITE; PS00418; POTEX_CARLAVIRUS_COAT; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Reference proteome;
KW Ribonucleoprotein; Virion.
FT CHAIN 1..240
FT /note="Coat protein"
FT /id="PRO_0000222622"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 240 AA; 26097 MW; 5B0D35A81737C5EB CRC64;
MATPSTQTTD PKPANADLSD PNRAPSLEDL KKIKYESTTT AVATPAEIQL LGDLFKKLGL
DANSVAPAMW DLARAYADVQ ASRSAVLSGT TPSNPAITRQ ALARQFYVIN ITPRQFCMYF
AKVVWNLLLD SNVPPAGWAK QGLPDDCKFA GFDFFEGVLS PAALDPADGL IRPPSQREIQ
AHSTAKYGAL ARQRYRMETS FPPWLKSLTV GSAVSTPCTP LKHLQNCNRN TSKLKLVCGL