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CAPSD_NMV
ID   CAPSD_NMV               Reviewed;         240 AA.
AC   P15100;
DT   01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-APR-1990, sequence version 1.
DT   23-FEB-2022, entry version 81.
DE   RecName: Full=Coat protein;
DE   AltName: Full=Capsid protein;
DE            Short=CP;
OS   Narcissus mosaic virus (NMV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Tymovirales; Alphaflexiviridae; Potexvirus.
OX   NCBI_TaxID=12180;
OH   NCBI_TaxID=39639; Narcissus pseudonarcissus (Daffodil).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2732689; DOI=10.1099/0022-1317-70-2-267;
RA   Zuidema D., Linthorst H.J.M., Huisman M.J., Asjes C.J., Bol J.F.;
RT   "Nucleotide sequence of narcissus mosaic virus RNA.";
RL   J. Gen. Virol. 70:267-276(1989).
RN   [2]
RP   REVIEW.
RX   PubMed=15828680; DOI=10.1094/mpmi-18-0283;
RA   Verchot-Lubicz J.;
RT   "A new cell-to-cell transport model for Potexviruses.";
RL   Mol. Plant Microbe Interact. 18:283-290(2005).
CC   -!- FUNCTION: Required for genome encapsidation. Forms ribonucleoprotein
CC       complexes along with TGB1 helicase and viral RNA.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the potexvirus capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; D13747; BAA02895.1; -; Genomic_RNA.
DR   PIR; JT0474; VCWGN4.
DR   RefSeq; NP_040782.1; NC_001441.1.
DR   SMR; P15100; -.
DR   GeneID; 1494019; -.
DR   KEGG; vg:1494019; -.
DR   Proteomes; UP000008865; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   InterPro; IPR000052; Pltvir_coat.
DR   Pfam; PF00286; Flexi_CP; 1.
DR   PRINTS; PR00232; POTXCARLCOAT.
DR   PROSITE; PS00418; POTEX_CARLAVIRUS_COAT; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Helical capsid protein; Reference proteome;
KW   Ribonucleoprotein; Virion.
FT   CHAIN           1..240
FT                   /note="Coat protein"
FT                   /id="PRO_0000222622"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..15
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   240 AA;  26097 MW;  5B0D35A81737C5EB CRC64;
     MATPSTQTTD PKPANADLSD PNRAPSLEDL KKIKYESTTT AVATPAEIQL LGDLFKKLGL
     DANSVAPAMW DLARAYADVQ ASRSAVLSGT TPSNPAITRQ ALARQFYVIN ITPRQFCMYF
     AKVVWNLLLD SNVPPAGWAK QGLPDDCKFA GFDFFEGVLS PAALDPADGL IRPPSQREIQ
     AHSTAKYGAL ARQRYRMETS FPPWLKSLTV GSAVSTPCTP LKHLQNCNRN TSKLKLVCGL
 
 
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