CAPSD_ORSVJ
ID CAPSD_ORSVJ Reviewed; 158 AA.
AC P03578;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 23-FEB-2022, entry version 72.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
GN Name=CP;
OS Odontoglossum ringspot virus (isolate Japan) (ORSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Virgaviridae; Tobamovirus.
OX NCBI_TaxID=138307;
OH NCBI_TaxID=14366; Cymbidium.
OH NCBI_TaxID=154697; Odontoglossum.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=1895062; DOI=10.1099/0022-1317-72-9-2247;
RA Isomura Y., Matumoto Y., Murayama A., Chatani M., Inouye N., Ikegami M.;
RT "Molecular cloning, sequencing and expression in Escherichia coli of the
RT odontoglossum ringspot virus coat protein gene.";
RL J. Gen. Virol. 72:2247-2249(1991).
RN [2]
RP PRELIMINARY PROTEIN SEQUENCE OF 2-158, AND ACETYLATION AT SER-2.
RA Hennig B.;
RL Thesis (1970), University of Tuebingen, Germany.
CC -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC about 18 nm in diameter with a central canal enclosing the viral
CC genomic RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; X55295; CAA39007.1; -; Genomic_RNA.
DR PIR; JQ1266; JQ1266.
DR PIR; S14468; S14468.
DR SMR; P03578; -.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.120.70; -; 1.
DR InterPro; IPR001337; TMV-like_coat.
DR InterPro; IPR036417; TMV-like_coat_sf.
DR Pfam; PF00721; TMV_coat; 1.
DR SUPFAM; SSF47195; SSF47195; 1.
PE 1: Evidence at protein level;
KW Acetylation; Capsid protein; Direct protein sequencing;
KW Helical capsid protein; Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT CHAIN 2..158
FT /note="Capsid protein"
FT /id="PRO_0000144932"
FT MOD_RES 2
FT /note="N-acetylserine; by host"
FT /evidence="ECO:0000269|Ref.2"
SQ SEQUENCE 158 AA; 17709 MW; 6F9F40484B089D08 CRC64;
MSYTITDPSK LAYLSSAWAD PNSLINLCTN SLGNQFQTQQ ARTTVQQQFA DVWQPVPTLT
SRFPAGAGYF RVYRYDPILD PLITFLMGTF DTRNRIIEVE NPQNPTTTET LDATRRVDDA
TVAIRSAINN LLNELVRGTG MYNQVSFETI SGLTWTSS