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CAPSD_ORSVJ
ID   CAPSD_ORSVJ             Reviewed;         158 AA.
AC   P03578;
DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 3.
DT   23-FEB-2022, entry version 72.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein;
GN   Name=CP;
OS   Odontoglossum ringspot virus (isolate Japan) (ORSV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Martellivirales; Virgaviridae; Tobamovirus.
OX   NCBI_TaxID=138307;
OH   NCBI_TaxID=14366; Cymbidium.
OH   NCBI_TaxID=154697; Odontoglossum.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=1895062; DOI=10.1099/0022-1317-72-9-2247;
RA   Isomura Y., Matumoto Y., Murayama A., Chatani M., Inouye N., Ikegami M.;
RT   "Molecular cloning, sequencing and expression in Escherichia coli of the
RT   odontoglossum ringspot virus coat protein gene.";
RL   J. Gen. Virol. 72:2247-2249(1991).
RN   [2]
RP   PRELIMINARY PROTEIN SEQUENCE OF 2-158, AND ACETYLATION AT SER-2.
RA   Hennig B.;
RL   Thesis (1970), University of Tuebingen, Germany.
CC   -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC       about 18 nm in diameter with a central canal enclosing the viral
CC       genomic RNA.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; X55295; CAA39007.1; -; Genomic_RNA.
DR   PIR; JQ1266; JQ1266.
DR   PIR; S14468; S14468.
DR   SMR; P03578; -.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 1.20.120.70; -; 1.
DR   InterPro; IPR001337; TMV-like_coat.
DR   InterPro; IPR036417; TMV-like_coat_sf.
DR   Pfam; PF00721; TMV_coat; 1.
DR   SUPFAM; SSF47195; SSF47195; 1.
PE   1: Evidence at protein level;
KW   Acetylation; Capsid protein; Direct protein sequencing;
KW   Helical capsid protein; Virion.
FT   INIT_MET        1
FT                   /note="Removed; by host"
FT   CHAIN           2..158
FT                   /note="Capsid protein"
FT                   /id="PRO_0000144932"
FT   MOD_RES         2
FT                   /note="N-acetylserine; by host"
FT                   /evidence="ECO:0000269|Ref.2"
SQ   SEQUENCE   158 AA;  17709 MW;  6F9F40484B089D08 CRC64;
     MSYTITDPSK LAYLSSAWAD PNSLINLCTN SLGNQFQTQQ ARTTVQQQFA DVWQPVPTLT
     SRFPAGAGYF RVYRYDPILD PLITFLMGTF DTRNRIIEVE NPQNPTTTET LDATRRVDDA
     TVAIRSAINN LLNELVRGTG MYNQVSFETI SGLTWTSS
 
 
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