CAPSD_ORSVS
ID CAPSD_ORSVS Reviewed; 158 AA.
AC Q84136;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
GN Name=CP;
OS Odontoglossum ringspot virus (isolate Singapore 1) (ORSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Virgaviridae; Tobamovirus.
OX NCBI_TaxID=138662;
OH NCBI_TaxID=14366; Cymbidium.
OH NCBI_TaxID=154697; Odontoglossum.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=8666266; DOI=10.1016/0378-1119(96)00046-7;
RA Chng C.G., Wong S.M., Mahtani P.H., Loh C.S., Goh C.J., Kao M.C.C.,
RA Chung M.C.M., Watanabe Y.;
RT "The complete sequence of a Singapore isolate of odontoglossum ringspot
RT virus and comparison with other tobamoviruses.";
RL Gene 171:155-161(1996).
CC -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC about 18 nm in diameter with a central canal enclosing the viral
CC genomic RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; U34586; AAC55015.1; -; Genomic_RNA.
DR SMR; Q84136; -.
DR Proteomes; UP000008384; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.120.70; -; 1.
DR InterPro; IPR001337; TMV-like_coat.
DR InterPro; IPR036417; TMV-like_coat_sf.
DR Pfam; PF00721; TMV_coat; 1.
DR SUPFAM; SSF47195; SSF47195; 1.
PE 3: Inferred from homology;
KW Acetylation; Capsid protein; Helical capsid protein; Reference proteome;
KW Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT /evidence="ECO:0000250"
FT CHAIN 2..158
FT /note="Capsid protein"
FT /id="PRO_0000144933"
FT MOD_RES 2
FT /note="N-acetylserine; by host"
FT /evidence="ECO:0000250"
SQ SEQUENCE 158 AA; 17727 MW; 6A8B40484B089D08 CRC64;
MSYTITDPSK LAYLSSAWAD PNSLINLCTN SLGNQFQTQQ ARTTVQQQFA DVWQPVPTLT
SRFPAGAGYF RVYRYDPILD PLITFLMGTF DTRNRIIEVE NPQNPTTTET LDATRRVDDA
TVAIRSAINN LLNELVRGTG MYNQVSFETM SGLTWTSS