CAPSD_PVMG
ID CAPSD_PVMG Reviewed; 304 AA.
AC Q01669;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 02-JUN-2021, entry version 68.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
OS Potato virus M (strain German) (PVM).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
OX NCBI_TaxID=31710;
OH NCBI_TaxID=4113; Solanum tuberosum (Potato).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2265707; DOI=10.1016/0014-5793(90)80500-i;
RA Gramstat A., Courtpozanis A., Rohde W.;
RT "The 12 kDa protein of potato virus M displays properties of a nucleic
RT acid-binding regulatory protein.";
RL FEBS Lett. 276:34-38(1990).
RN [2]
RP REVIEW.
RX PubMed=15828680; DOI=10.1094/mpmi-18-0283;
RA Verchot-Lubicz J.;
RT "A new cell-to-cell transport model for Potexviruses.";
RL Mol. Plant Microbe Interact. 18:283-290(2005).
CC -!- FUNCTION: Required for genome encapsidation. Forms ribonucleoprotein
CC complexes along with TGB1 helicase and viral RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- MISCELLANEOUS: The N- and the C-terminus of this capsid protein may be
CC exposed on the surface of the virus particle. The central core sequence
CC may be important in maintaining correct tertiary structure of the
CC capsid protein and/or play a role in interacting with the viral RNA.
CC -!- SIMILARITY: Belongs to the potexviruses coat protein family.
CC {ECO:0000305}.
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DR EMBL; X57440; CAA40688.1; -; Genomic_RNA.
DR PIR; S12975; S12975.
DR SMR; Q01669; -.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR013569; Carlavirus_coat_N.
DR InterPro; IPR000052; Pltvir_coat.
DR Pfam; PF00286; Flexi_CP; 1.
DR Pfam; PF08358; Flexi_CP_N; 1.
DR PRINTS; PR00232; POTXCARLCOAT.
DR PROSITE; PS00418; POTEX_CARLAVIRUS_COAT; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Ribonucleoprotein; Virion.
FT CHAIN 1..304
FT /note="Capsid protein"
FT /id="PRO_0000222641"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 304 AA; 33927 MW; E3B44FADE61D494F CRC64;
MGDSTKKAET AKDVGTSQEK REARPLPTAA DFEGKDTSED TDGRAADADG EMSLERRLDS
LREFLRERRG AIRVTNPGLE TGRPRLQLAE NMRPDPTNPY NRPSIEALSR IKPIAISNNM
ATSEDMMRIY VNLEGLGVPT EHVQQVVIQA VLFCKDASSS VFLDPRGSFE WPRGAITADA
VLAVLKKDAE TLRRVCRLYA PVTWNHMLTH NAPPAEWAAM GFQYEDRFAP FDCFDYVENT
AAVQPLEGLI RRPTPREKVA HNTHKDIALR GANRNQVFSS LNAEVTGGMN GPELTRDYVK
SNRK