CAPSD_RMVCA
ID CAPSD_RMVCA Reviewed; 157 AA.
AC Q9WDG7;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 23-FEB-2022, entry version 59.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
GN Name=CP;
OS Ribgrass mosaic virus (strain CAB) (RMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Virgaviridae; Tobamovirus.
OX NCBI_TaxID=138308;
OH NCBI_TaxID=49450; Digitalis lanata (Grecian foxglove).
OH NCBI_TaxID=75806; Eutrema japonicum (Wasabi plant) (Eutrema wasabi).
OH NCBI_TaxID=4097; Nicotiana tabacum (Common tobacco).
OH NCBI_TaxID=39414; Plantago lanceolata (English plantain) (Ribwort plantain).
OH NCBI_TaxID=29818; Plantago major (Common plantain).
OH NCBI_TaxID=65951; Rorippa amphibia (Great yellow-cress) (Nasturtium amphibium).
OH NCBI_TaxID=65952; Rorippa sylvestris (Creeping yellow-cress) (Nasturtium sylvestre).
OH NCBI_TaxID=52853; Silene latifolia subsp. alba (White campion) (Lychnis alba).
OH NCBI_TaxID=203579; Sisymbrium loeselii.
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Sohn S.-H., Choi H.-S., Jeon W.-B., Ryu T.-H., Hwang Y.-S.;
RT "The coat protein gene of Ribgrass Mosaic Virus isolated from Chinese
RT cabbage in Korea.";
RL Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC about 18 nm in diameter with a central canal enclosing the viral
CC genomic RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; AF103781; AAD20292.1; -; mRNA.
DR SMR; Q9WDG7; -.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.120.70; -; 1.
DR InterPro; IPR001337; TMV-like_coat.
DR InterPro; IPR036417; TMV-like_coat_sf.
DR Pfam; PF00721; TMV_coat; 1.
DR SUPFAM; SSF47195; SSF47195; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Capsid protein; Helical capsid protein; Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT /evidence="ECO:0000250"
FT CHAIN 2..157
FT /note="Capsid protein"
FT /id="PRO_0000144942"
FT MOD_RES 2
FT /note="N-acetylserine; by host"
FT /evidence="ECO:0000250"
SQ SEQUENCE 157 AA; 17689 MW; 10CD165E6F516B6E CRC64;
MSYNITSSNQ YQYFAAMWAE PQAMLNQCVS ALSQSYQTQA ARDTVRQQFS NLLSAIVTPN
QRFPESGYRV YINSAVLKPL YEALMKSFDT RNRIIETEEE SRPSASEVAN ATQRVDDATV
AIRSQIQLLL NELSNGHGLM NRAEFEVLLP WTTAPAT